RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 NUBP1P53384 320 aa9.45□□□□□ -0.9
HMBOX1-208ENST00000521516 GJA9P57773 515 aa9.45□□□□□ -0.9
HMBOX1-208ENST00000521516 MECOMQ03112 1051 aa9.45□□□□□ -0.9
HMBOX1-208ENST00000521516 ZYXQ15942 572 aaKnown RBP9.45□□□□□ -0.9
HMBOX1-208ENST00000521516 SPTY2D1Q68D10 685 aaPredicted RBP9.45□□□□□ -0.9
HMBOX1-208ENST00000521516 FEZ1Q99689 392 aa9.45□□□□□ -0.9
HMBOX1-208ENST00000521516 HOXC10Q9NYD6 342 aa9.45□□□□□ -0.9
HMBOX1-208ENST00000521516 CNPY2Q9Y2B0 182 aa9.45□□□□□ -0.9
HMBOX1-208ENST00000521516 PHKA1P46020 1223 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 VCPP55072 806 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 COG2Q14746 738 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 MSL3Q8N5Y2 521 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 MB21D1Q8N884 522 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 KLHDC4Q8TBB5 520 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 SCLYQ96I15 445 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 SEZ6LQ9BYH1 1024 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 BICC1Q9H694 974 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 CACNA1FO60840 1977 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 CTAGE5O15320 804 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 GH2P01242 217 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 C6orf222P0C671 652 aaPredicted RBP9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 ACTN1P12814 892 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 ERVK-21P61565 698 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 POP1Q99575 1024 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 ABCF2Q9UG63 623 aa9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 ZNFX1Q9P2E3 1918 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-208ENST00000521516 LCHNA4D1U4 455 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 NCAPG2Q86XI2 1143 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 TEX11Q8IYF3 940 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 ACER1Q8TDN7 264 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 PABPC5Q96DU9 382 aaKnown RBP9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 GRIN2DO15399 1336 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 H0Y858 1186 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 EYA2O00167 538 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 ADCY6O43306 1168 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 SNAI1O95863 264 aaPredicted RBP9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 PGK2P07205 417 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 NBPF7P0C2Y1 421 aaPredicted RBP9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 AVPR2P30518 371 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 RASGRF1Q13972 1273 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 KCTD2Q14681 263 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 SMAD2Q15796 467 aaKnown RBP9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 GNASQ5JWF2 1037 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 DGLUCYQ7Z3D6 616 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 TRPV6Q9H1D0 765 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 SPC25Q9HBM1 224 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 TLR9Q9NR96 1032 aa9.43□□□□□ -0.9
HMBOX1-208ENST00000521516 B4GALT4O60513 344 aa9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 LDHCP07864 332 aa9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 ZXDAP98168 799 aa9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 ATP2B3Q16720 1220 aa9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 ATG9AQ7Z3C6 839 aa9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 CRACR2BQ8N4Y2 399 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 TSR2Q969E8 191 aaKnown RBP9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 RMDN1Q96DB5 314 aa9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 MMP19Q99542 508 aa9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 ANKRD11Q6UB99 2663 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-208ENST00000521516 CABYRO75952 493 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 SLC25A27O95847 323 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 RFC2P35250 354 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 GSTO1P78417 241 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 COL9A2Q14055 689 aaPredicted RBP9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 MAMDC4Q6UXC1 1216 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 ERICH6Q7L0X2 663 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 ADSSL1Q8N142 457 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 NSUN4Q96CB9 384 aaKnown RBP9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 TGS1Q96RS0 853 aaKnown RBP9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 ADAMTS8Q9UP79 889 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 USP24Q9UPU5 2620 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 TNKSO95271 1327 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 DSG3P32926 999 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 RFX5P48382 616 aaPredicted RBP9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 ITGA7Q13683 1181 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 CCDC102BQ68D86 513 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 TATDN1Q6P1N9 297 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 SH3RF3Q8TEJ3 882 aaPredicted RBP9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
HMBOX1-208ENST00000521516 GALR2O43603 387 aaPredicted RBP9.4□□□□□ -0.9
HMBOX1-208ENST00000521516 BAIAP3O94812 1187 aa9.4□□□□□ -0.9
HMBOX1-208ENST00000521516 DEFB128Q7Z7B8 93 aa9.4□□□□□ -0.9
HMBOX1-208ENST00000521516 MRPL38Q96DV4 380 aaKnown RBP9.4□□□□□ -0.9
HMBOX1-208ENST00000521516 MAP1BP46821 2468 aaKnown RBP9.4□□□□□ -0.9
HMBOX1-208ENST00000521516 PLS1Q14651 629 aa9.4□□□□□ -0.91
HMBOX1-208ENST00000521516 ASIC4Q96FT7 647 aa9.4□□□□□ -0.91
HMBOX1-208ENST00000521516 SRCIN1Q9C0H9 1055 aa9.4□□□□□ -0.91
HMBOX1-208ENST00000521516 SIL1Q9H173 461 aa9.4□□□□□ -0.91
HMBOX1-208ENST00000521516 ZHX1Q9UKY1 873 aaPredicted RBP9.4□□□□□ -0.91
HMBOX1-208ENST00000521516 PTPRSQ13332 1948 aa9.4□□□□□ -0.91
HMBOX1-208ENST00000521516 FLT1P17948 1338 aa9.4□□□□□ -0.91
HMBOX1-208ENST00000521516 SIP14410 1827 aa9.4□□□□□ -0.91
HMBOX1-208ENST00000521516 EP300Q09472 2414 aaPredicted RBP9.39□□□□□ -0.91
HMBOX1-208ENST00000521516 A0A1B0GUL7 405 aa9.39□□□□□ -0.91
HMBOX1-208ENST00000521516 LINC01553A4QN01 128 aa9.39□□□□□ -0.91
HMBOX1-208ENST00000521516 LTBRP36941 435 aa9.39□□□□□ -0.91
HMBOX1-208ENST00000521516 SIGLEC14Q08ET2 396 aa9.39□□□□□ -0.91
HMBOX1-208ENST00000521516 TIGD5Q53EQ6 642 aa9.39□□□□□ -0.91
HMBOX1-208ENST00000521516 CXCL17Q6UXB2 119 aa9.39□□□□□ -0.91
HMBOX1-208ENST00000521516 NKD2Q969F2 451 aaPredicted RBP9.39□□□□□ -0.91
HMBOX1-208ENST00000521516 CTNNA3Q9UI47 895 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms