RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CDC25BP30305 580 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 KRT25Q7Z3Z0 450 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 CABP7Q86V35 215 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 GPIHBP1Q8IV16 184 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
CLK4-206ENST00000520878 MYRIPQ8NFW9 859 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 TMEM60Q9H2L4 133 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
CLK4-206ENST00000520878 STK32BQ9NY57 414 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 PCDHAC2Q9Y5I4 1007 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 A0A087X0B3 334 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 CYTH3O43739 400 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 ADCY7P51828 1080 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 CERKLQ49MI3 558 aaPredicted RBP12.82□□□□□ -0.36
CLK4-206ENST00000520878 LTBP4Q8N2S1 1624 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 MYH3P11055 1940 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
CLK4-206ENST00000520878 ATP2C1P98194 919 aaPredicted RBP12.82□□□□□ -0.36
CLK4-206ENST00000520878 RAD51AP2Q09MP3 1159 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 C16orf86Q6ZW13 317 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 NEK8Q86SG6 692 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 SHISA4Q96DD7 197 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 EXOC1Q9NV70 894 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 IMPACTQ9P2X3 320 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 GDAQ9Y2T3 454 aa12.82□□□□□ -0.36
CLK4-206ENST00000520878 PLCH1Q4KWH8 1693 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
CLK4-206ENST00000520878 TTLL1O95922 423 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 IL1R1P14778 569 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 TRAPPC10P48553 1259 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 NCAPHQ15003 741 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 IGSF22Q8N9C0 903 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 NELFBQ8WX92 580 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 DDX4Q9NQI0 724 aaKnown RBP12.81□□□□□ -0.36
CLK4-206ENST00000520878 BARHL2Q9NY43 387 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 PDE4DQ08499 809 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 CRY2Q49AN0 593 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 ZNF772Q68DY9 489 aaPredicted RBP12.81□□□□□ -0.36
CLK4-206ENST00000520878 CDC42EP5Q6NZY7 148 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 LARGE2Q8N3Y3 721 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 BAG1Q99933 345 aaPredicted RBP12.81□□□□□ -0.36
CLK4-206ENST00000520878 DESI2Q9BSY9 194 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 TANGO6Q9C0B7 1094 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 RMND1Q9NWS8 449 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 LRWD1Q9UFC0 647 aa12.81□□□□□ -0.36
CLK4-206ENST00000520878 RGL2O15211 777 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 GNG11P61952 73 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 ARMCX5Q6P1M9 558 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 TMC4Q7Z404 712 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 PYM1Q9BRP8 204 aaKnown RBP12.8□□□□□ -0.36
CLK4-206ENST00000520878 OR52Z1P0C646 297 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 BMP6P22004 513 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 RHBDL3P58872 404 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 PAK1Q13153 545 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 CALCRLQ16602 461 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 RAB34Q9BZG1 259 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 RPN1P04843 607 aaKnown RBP12.8□□□□□ -0.36
CLK4-206ENST00000520878 MTIF2P46199 727 aaKnown RBP12.8□□□□□ -0.36
CLK4-206ENST00000520878 UBXN1Q04323 297 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 FCHSD1Q86WN1 690 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 LZTFL1Q9NQ48 299 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 MTMR4Q9NYA4 1195 aa12.8□□□□□ -0.36
CLK4-206ENST00000520878 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
CLK4-206ENST00000520878 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
CLK4-206ENST00000520878 PSMA7O14818 248 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 ECE2O60344 883 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 LONP1P36776 959 aaKnown RBP12.79□□□□□ -0.36
CLK4-206ENST00000520878 MRPL12P52815 198 aaKnown RBP12.79□□□□□ -0.36
CLK4-206ENST00000520878 SPECC1LQ69YQ0 1117 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 GSDMAQ96QA5 445 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 ZSWIM4Q9H7M6 989 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 SPTLC3Q9NUV7 552 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 STXBP3O00186 592 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 FGRP09769 529 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 HOXA10P31260 410 aaPredicted RBP12.79□□□□□ -0.36
CLK4-206ENST00000520878 ZFPM1Q8IX07 1006 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 ENOX1Q8TC92 643 aaKnown RBP12.79□□□□□ -0.36
CLK4-206ENST00000520878 GJA10Q969M2 543 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 BPIFA3Q9BQP9 254 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 BAZ2AQ9UIF9 1905 aaKnown RBP12.79□□□□□ -0.36
CLK4-206ENST00000520878 USP17L10C9JJH3 530 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 TEX33O43247 280 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 ZSCAN12O43309 604 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 GTPBP6O43824 516 aaPredicted RBP12.79□□□□□ -0.36
CLK4-206ENST00000520878 MORC3Q14149 939 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 SPATA1Q5VX52 437 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 KRT79Q5XKE5 535 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 SLFN13Q68D06 897 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 PSTPIP2Q9H939 334 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
CLK4-206ENST00000520878 PAXBP1Q9Y5B6 917 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
CLK4-206ENST00000520878 AMPD3Q01432 767 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms