RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 STAT3P40763 770 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 RGS2P41220 211 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 SLC1A4P43007 532 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 TRIM32Q13049 653 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 SEC23AQ15436 765 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.09□□□□□ -0.31
PABPC1-214ENST00000520142 DCAF4Q8WV16 495 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 SHISA4Q96DD7 197 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 APBA2Q99767 749 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 KRT23Q9C075 422 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 CNNM2Q9H8M5 875 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 PAK6Q9NQU5 681 aaPredicted RBP13.09□□□□□ -0.31
PABPC1-214ENST00000520142 RIPK3Q9Y572 518 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 ZNF536O15090 1300 aa13.09□□□□□ -0.31
PABPC1-214ENST00000520142 KIAA0100Q14667 2235 aaKnown RBP13.08□□□□□ -0.32
PABPC1-214ENST00000520142 HMGCRP04035 888 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 GJB1P08034 283 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 FDX1P10109 184 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 PDHBP11177 359 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-214ENST00000520142 STAT2P52630 851 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 OAZ1P54368 228 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 UBXN2AP68543 259 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 NECTIN1Q15223 517 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 CCL14Q16627 93 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 CASC1Q6TDU7 716 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 KCTD1Q719H9 257 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 CYB5R4Q7L1T6 521 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 FAM160B2Q86V87 743 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 TRMT44Q8IYL2 757 aaKnown RBP13.08□□□□□ -0.32
PABPC1-214ENST00000520142 ENAHQ8N8S7 591 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-214ENST00000520142 NPLOC4Q8TAT6 608 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 KIFC2Q96AC6 838 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
PABPC1-214ENST00000520142 ZKSCAN3Q9BRR0 538 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 TEX13BQ9BXU2 312 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 UNC93B1Q9H1C4 597 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 FLRT1Q9NZU1 646 aa13.08□□□□□ -0.32
PABPC1-214ENST00000520142 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
PABPC1-214ENST00000520142 E7EWF7 191 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 COBLO75128 1261 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 ADORA2AP29274 412 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 COPB2P35606 906 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 GJA8P48165 433 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 PLS1Q14651 629 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 TTBK2Q6IQ55 1244 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 IQCA1Q86XH1 822 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 NCAPG2Q86XI2 1143 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 CCAR1Q8IX12 1150 aaKnown RBP13.07□□□□□ -0.32
PABPC1-214ENST00000520142 CHURC1Q8WUH1 139 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 TMEM106CQ9BVX2 250 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 TNKSO95271 1327 aa13.07□□□□□ -0.32
PABPC1-214ENST00000520142 DNAJC25-GNG10A0A024R161 153 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 ZBED4O75132 1171 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 CDC45O75419 566 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 MYCP01106 439 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-214ENST00000520142 ZNF543Q08ER8 600 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 WDR78Q5VTH9 848 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 SNRNP48Q6IEG0 339 aaKnown RBP13.06□□□□□ -0.32
PABPC1-214ENST00000520142 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-214ENST00000520142 UBE2Q1Q7Z7E8 422 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 MB21D2Q8IYB1 491 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-214ENST00000520142 CRISPLD2Q9H0B8 497 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 RNF208Q9H0X6 261 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 RAVER2Q9HCJ3 691 aaKnown RBP13.06□□□□□ -0.32
PABPC1-214ENST00000520142 IVNS1ABPQ9Y6Y0 642 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 RPTORQ8N122 1335 aa13.06□□□□□ -0.32
PABPC1-214ENST00000520142 MKI67P46013 3256 aaKnown RBP13.06□□□□□ -0.32
PABPC1-214ENST00000520142 SGPL1O95470 568 aa13.05□□□□□ -0.32
PABPC1-214ENST00000520142 FCER1AP12319 257 aa13.05□□□□□ -0.32
PABPC1-214ENST00000520142 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
PABPC1-214ENST00000520142 ANTXR2P58335 489 aa13.05□□□□□ -0.32
PABPC1-214ENST00000520142 CACNB2Q08289 660 aaPredicted RBP13.05□□□□□ -0.32
PABPC1-214ENST00000520142 COL9A3Q14050 684 aaPredicted RBP13.05□□□□□ -0.32
PABPC1-214ENST00000520142 ZNF792Q3KQV3 632 aa13.05□□□□□ -0.32
PABPC1-214ENST00000520142 OLFML2BQ68BL8 750 aa13.05□□□□□ -0.32
PABPC1-214ENST00000520142 PNMA1Q8ND90 353 aa13.05□□□□□ -0.32
PABPC1-214ENST00000520142 U2AF1L4Q8WU68 220 aaKnown RBP13.05□□□□□ -0.32
PABPC1-214ENST00000520142 CHMP4CQ96CF2 233 aa13.05□□□□□ -0.32
PABPC1-214ENST00000520142 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.05□□□□□ -0.322e-7■■■□□ 16.8
PABPC1-214ENST00000520142 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
PABPC1-214ENST00000520142 BIN2Q9UBW5 565 aaPredicted RBP13.05□□□□□ -0.32
PABPC1-214ENST00000520142 DIS3Q9Y2L1 958 aaKnown RBP13.05□□□□□ -0.32
PABPC1-214ENST00000520142 SLC27A2O14975 620 aa13.04□□□□□ -0.32
PABPC1-214ENST00000520142 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
PABPC1-214ENST00000520142 CAPN2P17655 700 aa13.04□□□□□ -0.32
PABPC1-214ENST00000520142 PRPF38BQ5VTL8 546 aaKnown RBP13.04□□□□□ -0.32
PABPC1-214ENST00000520142 CREB3L3Q68CJ9 461 aa13.04□□□□□ -0.32
PABPC1-214ENST00000520142 KIAA1211Q6ZU35 1233 aa13.04□□□□□ -0.32
PABPC1-214ENST00000520142 CPXCR1Q8N123 301 aa13.04□□□□□ -0.32
PABPC1-214ENST00000520142 CHST13Q8NET6 341 aa13.04□□□□□ -0.32
PABPC1-214ENST00000520142 NCOA7Q8NI08 942 aa13.04□□□□□ -0.32
PABPC1-214ENST00000520142 MAML3Q96JK9 1138 aa13.04□□□□□ -0.32
PABPC1-214ENST00000520142 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
PABPC1-214ENST00000520142 HMX1Q9NP08 348 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-214ENST00000520142 FRMPD2Q68DX3 1309 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-214ENST00000520142 SLC16A2P36021 539 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms