RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PLIN4Q96Q06 1357 aa14.81□□□□□ -0.04
CSMD1-205ENST00000519623 DNAJC25-GNG10A0A024R161 153 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 ZBED4O75132 1171 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 SLC3A2P08195 630 aaKnown RBP14.8□□□□□ -0.04
CSMD1-205ENST00000519623 ZNF865P0CJ78 1059 aaPredicted RBP14.8□□□□□ -0.04
CSMD1-205ENST00000519623 TSPY3P0CV98 308 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 TSPY8P0CW00 308 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 PDE1AP54750 535 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 LRRC41Q15345 812 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 LRIT3Q3SXY7 679 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 SLFN13Q68D06 897 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 TDHQ8IZJ6 230 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 LRRC47Q8N1G4 583 aaKnown RBP14.8□□□□□ -0.04
CSMD1-205ENST00000519623 EVI5LQ96CN4 794 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 SLC38A10Q9HBR0 1119 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 FEM1BQ9UK73 627 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
CSMD1-205ENST00000519623 TACC3Q9Y6A5 838 aa14.8□□□□□ -0.04
CSMD1-205ENST00000519623 KBTBD13C9JR72 458 aa14.79□□□□□ -0.04
CSMD1-205ENST00000519623 BMP3P12645 472 aa14.79□□□□□ -0.04
CSMD1-205ENST00000519623 ADCYAP1R1P41586 468 aa14.79□□□□□ -0.04
CSMD1-205ENST00000519623 RTP1P59025 263 aa14.79□□□□□ -0.04
CSMD1-205ENST00000519623 MDM2Q00987 491 aaPredicted RBP14.79□□□□□ -0.04
CSMD1-205ENST00000519623 CTDSPL2Q05D32 466 aa14.79□□□□□ -0.04
CSMD1-205ENST00000519623 VPS53Q5VIR6 699 aa14.79□□□□□ -0.04
CSMD1-205ENST00000519623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.79□□□□□ -0.04
CSMD1-205ENST00000519623 CPXCR1Q8N123 301 aa14.79□□□□□ -0.04
CSMD1-205ENST00000519623 KIFC2Q96AC6 838 aa14.79□□□□□ -0.04
CSMD1-205ENST00000519623 RAVER2Q9HCJ3 691 aaKnown RBP14.79□□□□□ -0.04
CSMD1-205ENST00000519623 IL17RBQ9NRM6 502 aa14.79□□□□□ -0.04
CSMD1-205ENST00000519623 ZBTB47Q9UFB7 747 aaPredicted RBP14.79□□□□□ -0.04
CSMD1-205ENST00000519623 SNAI1O95863 264 aaPredicted RBP14.78□□□□□ -0.04
CSMD1-205ENST00000519623 SNX17Q15036 470 aa14.78□□□□□ -0.04
CSMD1-205ENST00000519623 ALX1Q15699 326 aa14.78□□□□□ -0.04
CSMD1-205ENST00000519623 MAMDC4Q6UXC1 1216 aa14.78□□□□□ -0.04
CSMD1-205ENST00000519623 MSL3Q8N5Y2 521 aaKnown RBP14.78□□□□□ -0.04
CSMD1-205ENST00000519623 DDX11Q96FC9 970 aa14.78□□□□□ -0.04
CSMD1-205ENST00000519623 HELLSQ9NRZ9 838 aa14.78□□□□□ -0.04
CSMD1-205ENST00000519623 ANAPC4Q9UJX5 808 aa14.78□□□□□ -0.04
CSMD1-205ENST00000519623 TMEM232C9JQI7 657 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 MYCNP04198 464 aaPredicted RBP14.77□□□□□ -0.05
CSMD1-205ENST00000519623 FGRP09769 529 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 RARBP10826 455 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 SLC4A3P48751 1232 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 OAZ1P54368 228 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 C1orf53Q5VUE5 145 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 GPR153Q6NV75 609 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 FERMT2Q96AC1 680 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 GMCL1Q96IK5 515 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 XPNPEP3Q9NQH7 507 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 PHF24Q9UPV7 400 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 ATP11BQ9Y2G3 1177 aa14.77□□□□□ -0.05
CSMD1-205ENST00000519623 SYNGAP1Q96PV0 1343 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 NMT2O60551 498 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 PGK1P00558 417 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 FDX1P10109 184 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 MCCP23508 829 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 NOVP48745 357 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
CSMD1-205ENST00000519623 TICAM2Q86XR7 235 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 CHST13Q8NET6 341 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 STAG1Q8WVM7 1258 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 FAM227BQ96M60 508 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 FGD4Q96M96 766 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 CNPY2Q9Y2B0 182 aa14.76□□□□□ -0.05
CSMD1-205ENST00000519623 CTDP1Q9Y5B0 961 aaPredicted RBP14.76□□□□□ -0.05
CSMD1-205ENST00000519623 ZNF536O15090 1300 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 A0A0D9SFI3 127 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 TSPY2A6NKD2 308 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 ORC4O43929 436 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 PLA2G6O60733 806 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 ADAMTS4O75173 837 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 FGAP02671 866 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 AKR1A1P14550 325 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 SLC1A4P43007 532 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 AAMPQ13685 434 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 TRIM60Q495X7 471 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 MCMDC2Q4G0Z9 681 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 PPP4R3BQ5MIZ7 849 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 RCSD1Q6JBY9 416 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 SMC5Q8IY18 1101 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 ANKRD35Q8N283 1001 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 CHURC1Q8WUH1 139 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 LENG1Q96BZ8 264 aaPredicted RBP14.75□□□□□ -0.05
CSMD1-205ENST00000519623 CHMP4CQ96CF2 233 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 LBHD1Q9BQE6 289 aaPredicted RBP14.75□□□□□ -0.05
CSMD1-205ENST00000519623 LNPKQ9C0E8 428 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 FBXO40Q9UH90 709 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 STX8Q9UNK0 236 aa14.75□□□□□ -0.05
CSMD1-205ENST00000519623 RANBP6O60518 1105 aaKnown RBP14.74□□□□□ -0.05
CSMD1-205ENST00000519623 STAT2P52630 851 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 TLE2Q04725 743 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 KCTD1Q719H9 257 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 SH3RF1Q7Z6J0 888 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 RNF180Q86T96 592 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 FAM160B2Q86V87 743 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 KLHDC9Q8NEP7 349 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 AGBL1Q96MI9 1066 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 PRKAG2Q9UGJ0 569 aa14.74□□□□□ -0.05
CSMD1-205ENST00000519623 FAM184BQ9ULE4 1060 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms