RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 TMEM179Q6ZVK1 233 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 CMTR1Q8N1G2 835 aaKnown RBP9.2□□□□□ -0.94
CLK4-203ENST00000519583 CCDC82Q8N4S0 544 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 FEZ1Q99689 392 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 BTBD19C9JJ37 291 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 NMT2O60551 498 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 FMNL1O95466 1100 aaPredicted RBP9.2□□□□□ -0.94
CLK4-203ENST00000519583 IFNAR1P17181 557 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 RASA1P20936 1047 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 GUCY1A2P33402 732 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 MTMR2Q13614 643 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 IFIT1BQ5T764 474 aaKnown RBP9.2□□□□□ -0.94
CLK4-203ENST00000519583 KRT40Q6A162 431 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 FANCBQ8NB91 859 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 BICD2Q8TD16 824 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 WDR18Q9BV38 432 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 LAMB1P07942 1786 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 A0A0G2JLL6 359 aaPredicted RBP9.19□□□□□ -0.94
CLK4-203ENST00000519583 USP17L10C9JJH3 530 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 CA12O43570 354 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 HMGCS2P54868 508 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 FASTKD5Q7L8L6 764 aaKnown RBP9.19□□□□□ -0.94
CLK4-203ENST00000519583 PRRT2Q7Z6L0 340 aaPredicted RBP9.19□□□□□ -0.94
CLK4-203ENST00000519583 CLEC10AQ8IUN9 316 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 FAM43AQ8N2R8 423 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 RCOR1Q9UKL0 485 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 STK36Q9NRP7 1315 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 MYH8P13535 1937 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 TBC1D8O95759 1140 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 ALDH1A1P00352 501 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 RCAN1P53805 252 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 BACE1P56817 501 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 ATP2B2Q01814 1243 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 DGKZQ13574 1117 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 ZYXQ15942 572 aaKnown RBP9.19□□□□□ -0.94
CLK4-203ENST00000519583 ATL3Q6DD88 541 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 RNF214Q8ND24 703 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 ACER1Q8TDN7 264 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 CCDC196A0A1B0GTZ2 297 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 CTCFP49711 727 aaPredicted RBP9.19□□□□□ -0.94
CLK4-203ENST00000519583 ICA1Q05084 483 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 CATIPQ7Z7H3 387 aa9.19□□□□□ -0.94
CLK4-203ENST00000519583 PHIPQ8WWQ0 1821 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 TSPY2A6NKD2 308 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 LETM1O95202 739 aaPredicted RBP9.18□□□□□ -0.94
CLK4-203ENST00000519583 MOGSQ13724 837 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 TRIM29Q14134 588 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 TAF1CQ15572 869 aaPredicted RBP9.18□□□□□ -0.94
CLK4-203ENST00000519583 MYSM1Q5VVJ2 828 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 BRAPQ7Z569 592 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 NBPF11Q86T75 865 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 TRIM22Q8IYM9 498 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 SAGE1Q9NXZ1 904 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 DACT1Q9NYF0 836 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 TMOD4Q9NZQ9 345 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 TSPY3P0CV98 308 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 TSPY8P0CW00 308 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 TFAP4Q01664 338 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 ARHGEF10LQ9HCE6 1279 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 CLIC4Q9Y696 253 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 C19orf81C9J6K1 198 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 PDHXO00330 501 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 HSPA8P11142 646 aaKnown RBP9.18□□□□□ -0.94
CLK4-203ENST00000519583 LBX1P52954 281 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 CAMK4Q16566 473 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 ANKRD23Q86SG2 305 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLK4-203ENST00000519583 NUP62CLQ9H1M0 184 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 KANSL2Q9H9L4 492 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 RTEL1Q9NZ71 1219 aa9.18□□□□□ -0.94
CLK4-203ENST00000519583 NR1I2O75469 434 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 TROAPQ12815 778 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 CRHR2Q13324 411 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 TREML2Q5T2D2 321 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 GPAT2Q6NUI2 795 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 USP17L2Q6R6M4 530 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 RGS22Q8NE09 1264 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 WASF1Q92558 559 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 R3HDMLQ9H3Y0 253 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 A0A1W2PRG0 241 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 PLEKHA8P1O95397 391 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 EEF2P13639 858 aaKnown RBP9.17□□□□□ -0.94
CLK4-203ENST00000519583 ME1P48163 572 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 GNL2Q13823 731 aaKnown RBP9.17□□□□□ -0.94
CLK4-203ENST00000519583 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 PROCA1Q8NCQ7 364 aaPredicted RBP9.17□□□□□ -0.94
CLK4-203ENST00000519583 ZFYVE28Q9HCC9 887 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 AGTPBP1Q9UPW5 1226 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 RAD21O60216 631 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 DDAH1O94760 285 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 DEXIO95424 95 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 USP14P54578 494 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 STK38Q15208 465 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 CCAR1Q8IX12 1150 aaKnown RBP9.17□□□□□ -0.94
CLK4-203ENST00000519583 LINC00301Q8NCQ3 95 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 NEDD1Q8NHV4 660 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 KIAA1683Q9H0B3 1180 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 EMILIN3Q9NT22 766 aa9.17□□□□□ -0.94
CLK4-203ENST00000519583 DDX19AQ9NUU7 478 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms