RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CPVLQ9H3G5 476 aa16.67■□□□□ 0.26
CLN8-204ENST00000519254 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
CLN8-204ENST00000519254 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
CLN8-204ENST00000519254 BTBD18B2RXH4 712 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 F5H6K3 240 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 SLC1A4P43007 532 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 FMR1Q06787 632 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLN8-204ENST00000519254 KLRC3Q07444 240 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
CLN8-204ENST00000519254 ANO1Q5XXA6 986 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 MOB2Q70IA6 237 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 KCTD1Q719H9 257 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLN8-204ENST00000519254 BICD2Q8TD16 824 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 PCDHA7Q9UN72 937 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 NR1I2O75469 434 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 NDUFB10O96000 172 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 GNAQP50148 359 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 STK38Q15208 465 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 ASPRV1Q53RT3 343 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 NOSTRINQ8IVI9 506 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 DIS3L2Q8IYB7 885 aaKnown RBP16.66■□□□□ 0.26
CLN8-204ENST00000519254 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 NUP88Q99567 741 aaPredicted RBP16.66■□□□□ 0.26
CLN8-204ENST00000519254 FOXP1Q9H334 677 aaPredicted RBP16.66■□□□□ 0.26
CLN8-204ENST00000519254 TSPY26PQ9H489 355 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 SH2D4AQ9H788 454 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 GOPCQ9HD26 462 aa16.66■□□□□ 0.26
CLN8-204ENST00000519254 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 PTPRAP18433 802 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 ME1P48163 572 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 IREB2P48200 963 aaKnown RBP16.65■□□□□ 0.26
CLN8-204ENST00000519254 ZNF543Q08ER8 600 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 VGLL4Q14135 290 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 SAFBQ15424 915 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLN8-204ENST00000519254 CCAR1Q8IX12 1150 aaKnown RBP16.65■□□□□ 0.26
CLN8-204ENST00000519254 KCNG4Q8TDN1 519 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 PHF20Q9BVI0 1012 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 UBA5Q9GZZ9 404 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 GOLPH3LQ9H4A5 285 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 VPS54Q9P1Q0 977 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 TMX2Q9Y320 296 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 OTOFQ9HC10 1997 aa16.65■□□□□ 0.26
CLN8-204ENST00000519254 SPTLC2O15270 562 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 MAP3K9P80192 1104 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 SLC39A14Q15043 492 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.64■□□□□ 0.25
CLN8-204ENST00000519254 OXER1Q8TDS5 423 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 DCAF4Q8WV16 495 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 FUCA2Q9BTY2 467 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 NUP62CLQ9H1M0 184 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 DDX19AQ9NUU7 478 aaKnown RBP16.64■□□□□ 0.25
CLN8-204ENST00000519254 CSADQ9Y600 493 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 PTPAQ15257 358 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 SF3A1Q15459 793 aaKnown RBP16.64■□□□□ 0.25
CLN8-204ENST00000519254 SLC35G1Q2M3R5 365 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 KIAA1755Q5JYT7 1200 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 ADALQ6DHV7 355 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 CLSTN2Q9H4D0 955 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 VAT1LQ9HCJ6 419 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 ZHX2Q9Y6X8 837 aa16.64■□□□□ 0.25
CLN8-204ENST00000519254 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 TRIM75PA6NK02 468 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 XBP1P17861 261 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 SLC16A2P36021 539 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 TOB1P50616 345 aaPredicted RBP16.63■□□□□ 0.25
CLN8-204ENST00000519254 SPP2Q13103 211 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 IKQ13123 557 aaPredicted RBP16.63■□□□□ 0.25
CLN8-204ENST00000519254 NR5A1Q13285 461 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 DGKZQ13574 1117 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 MTMR2Q13614 643 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 NOL9Q5SY16 702 aaKnown RBP16.63■□□□□ 0.25
CLN8-204ENST00000519254 GPATCH4Q5T3I0 446 aaKnown RBP16.63■□□□□ 0.25
CLN8-204ENST00000519254 HOMER1Q86YM7 354 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 ENGASEQ8NFI3 743 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 VCPKMTQ9H867 229 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 AS3MTQ9HBK9 375 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 SYNPO2Q9UMS6 1093 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 SNCAIPQ9Y6H5 919 aa16.63■□□□□ 0.25
CLN8-204ENST00000519254 PAPPA2Q9BXP8 1791 aa16.62■□□□□ 0.25
CLN8-204ENST00000519254 CYTH3O43739 400 aa16.62■□□□□ 0.25
CLN8-204ENST00000519254 BMP3P12645 472 aa16.62■□□□□ 0.25
CLN8-204ENST00000519254 SCG2P13521 617 aa16.62■□□□□ 0.25
CLN8-204ENST00000519254 SNW1Q13573 536 aaKnown RBP16.62■□□□□ 0.25
CLN8-204ENST00000519254 NPY5RQ15761 445 aa16.62■□□□□ 0.25
CLN8-204ENST00000519254 CAMK4Q16566 473 aa16.62■□□□□ 0.25
CLN8-204ENST00000519254 PFKFB3Q16875 520 aaPredicted RBP16.62■□□□□ 0.25
CLN8-204ENST00000519254 ARMC9Q7Z3E5 817 aa16.62■□□□□ 0.25
CLN8-204ENST00000519254 GMCL1Q96IK5 515 aa16.62■□□□□ 0.25
CLN8-204ENST00000519254 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
CLN8-204ENST00000519254 GPBP1L1Q9HC44 474 aaPredicted RBP16.62■□□□□ 0.25
CLN8-204ENST00000519254 FAM83BQ5T0W9 1011 aa16.61■□□□□ 0.25
CLN8-204ENST00000519254 AXDND1Q5T1B0 1012 aaPredicted RBP16.61■□□□□ 0.25
CLN8-204ENST00000519254 RBM43Q6ZSC3 357 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms