RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 KLHDC9Q8NEP7 349 aa22.78■■□□□ 1.24
CTNNA1-213ENST00000519113 TIFAQ96CG3 184 aa22.78■■□□□ 1.24
CTNNA1-213ENST00000519113 DDX11Q96FC9 970 aa22.78■■□□□ 1.24
CTNNA1-213ENST00000519113 TEX13BQ9BXU2 312 aa22.78■■□□□ 1.24
CTNNA1-213ENST00000519113 MROH7Q68CQ1 1323 aa22.78■■□□□ 1.24
CTNNA1-213ENST00000519113 SYNRGQ9UMZ2 1314 aa22.78■■□□□ 1.24
CTNNA1-213ENST00000519113 MUC3AQ02505 3323 aa22.77■■□□□ 1.24
CTNNA1-213ENST00000519113 KCNA10Q16322 511 aa22.77■■□□□ 1.24
CTNNA1-213ENST00000519113 MAMDC4Q6UXC1 1216 aa22.77■■□□□ 1.24
CTNNA1-213ENST00000519113 GLT1D1Q96MS3 346 aa22.77■■□□□ 1.24
CTNNA1-213ENST00000519113 SLF1Q9BQI6 1058 aa22.77■■□□□ 1.24
CTNNA1-213ENST00000519113 ELP1O95163 1332 aa22.77■■□□□ 1.24
CTNNA1-213ENST00000519113 ZNFX1Q9P2E3 1918 aaKnown RBP22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 SMIM22K7EJ46 135 aa22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 DUSP11O75319 330 aaKnown RBP22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 HMMRO75330 724 aa22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 PPIGQ13427 754 aaKnown RBP eCLIP22.76■■□□□ 1.232e-8■□□□□ 10.5
CTNNA1-213ENST00000519113 UBE3CQ15386 1083 aa22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 SLFNL1Q499Z3 407 aa22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 CCSAPQ6IQ19 270 aaPredicted RBP22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 MFSD5Q6N075 450 aa22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 PCSK9Q8NBP7 692 aaKnown RBP22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 BCL11AQ9H165 835 aa22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 BOLA2Q9H3K6 86 aa22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 ZHX1Q9UKY1 873 aaPredicted RBP22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 TBX21Q9UL17 535 aa22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 SLC4A4Q9Y6R1 1079 aa22.76■■□□□ 1.23
CTNNA1-213ENST00000519113 SNAI1O95863 264 aaPredicted RBP22.75■■□□□ 1.23
CTNNA1-213ENST00000519113 ATP5JP18859 108 aa22.75■■□□□ 1.23
CTNNA1-213ENST00000519113 SNRNP48Q6IEG0 339 aaKnown RBP22.75■■□□□ 1.23
CTNNA1-213ENST00000519113 CTR9Q6PD62 1173 aa22.75■■□□□ 1.23
CTNNA1-213ENST00000519113 ZNF467Q7Z7K2 595 aaPredicted RBP22.75■■□□□ 1.23
CTNNA1-213ENST00000519113 RPAP2Q8IXW5 612 aaPredicted RBP22.75■■□□□ 1.23
CTNNA1-213ENST00000519113 USP38Q8NB14 1042 aa22.75■■□□□ 1.23
CTNNA1-213ENST00000519113 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.75■■□□□ 1.235e-13■■□□□ 13.1
CTNNA1-213ENST00000519113 SPC25Q9HBM1 224 aa22.75■■□□□ 1.23
CTNNA1-213ENST00000519113 RAB11FIP3O75154 756 aa22.74■■□□□ 1.23
CTNNA1-213ENST00000519113 CST5P28325 142 aaPredicted RBP22.74■■□□□ 1.23
CTNNA1-213ENST00000519113 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
CTNNA1-213ENST00000519113 PRPF38AQ8NAV1 312 aaKnown RBP22.74■■□□□ 1.23
CTNNA1-213ENST00000519113 PANK1Q8TE04 598 aa22.74■■□□□ 1.23
CTNNA1-213ENST00000519113 VTI1AQ96AJ9 217 aa22.74■■□□□ 1.23
CTNNA1-213ENST00000519113 GAS2L1Q99501 681 aaPredicted RBP22.74■■□□□ 1.23
CTNNA1-213ENST00000519113 HAUS7Q99871 368 aa22.74■■□□□ 1.23
CTNNA1-213ENST00000519113 CTDP1Q9Y5B0 961 aaPredicted RBP22.74■■□□□ 1.23
CTNNA1-213ENST00000519113 DNAJC25-GNG10A0A024R161 153 aa22.73■■□□□ 1.23
CTNNA1-213ENST00000519113 TNFRSF10AO00220 468 aa22.73■■□□□ 1.23
CTNNA1-213ENST00000519113 C6orf222P0C671 652 aaPredicted RBP22.73■■□□□ 1.23
CTNNA1-213ENST00000519113 ACVR2BQ13705 512 aa22.73■■□□□ 1.23
CTNNA1-213ENST00000519113 ZSCAN25Q6NSZ9 544 aa22.73■■□□□ 1.23
CTNNA1-213ENST00000519113 CCDC129Q6ZRS4 1044 aa22.73■■□□□ 1.23
CTNNA1-213ENST00000519113 TMEM199Q8N511 208 aa22.73■■□□□ 1.23
CTNNA1-213ENST00000519113 ATP2A1O14983 1001 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 ZBED4O75132 1171 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 MS4A1P11836 297 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 CDK7P50613 346 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 TMEM240Q5SV17 173 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 NUP88Q99567 741 aaPredicted RBP22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 ABHD16BQ9H3Z7 469 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 NYAP2Q9P242 653 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 ARPP21Q9UBL0 812 aaPredicted RBP22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 RIPK3Q9Y572 518 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 PARP14Q460N5 1801 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 MYH8P13535 1937 aa22.72■■□□□ 1.23
CTNNA1-213ENST00000519113 COL11A1P12107 1806 aaPredicted RBP22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 A0A0U1RQG5 324 aaPredicted RBP22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 F5H6K3 240 aa22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 ARVCFO00192 962 aa22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 ASGR1P07306 291 aa22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 SLC4A3P48751 1232 aa22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 IRX6P78412 446 aaPredicted RBP22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 KLRC3Q07444 240 aa22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 MKNK2Q9HBH9 465 aa22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.71■■□□□ 1.23
CTNNA1-213ENST00000519113 MYADML2A6NDP7 307 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 TLR3O15455 904 aaKnown RBP22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 RRP1P56182 461 aaKnown RBP22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 GJA9P57773 515 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 GNASQ5JWF2 1037 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 AKNAD1Q5T1N1 836 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 RASIP1Q5U651 963 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 PSRC1Q6PGN9 363 aaPredicted RBP22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 C16orf59Q7L2K0 433 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 CPXCR1Q8N123 301 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 ANKRD35Q8N283 1001 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 ATXN2LQ8WWM7 1075 aaKnown RBP22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 PBX4Q9BYU1 374 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 UPF3AQ9H1J1 476 aaKnown RBP22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 FBXO40Q9UH90 709 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 PLXNA1Q9UIW2 1896 aa22.7■■□□□ 1.22
CTNNA1-213ENST00000519113 NDUFB10O96000 172 aa22.69■■□□□ 1.22
CTNNA1-213ENST00000519113 CSF2RAP15509 400 aa22.69■■□□□ 1.22
CTNNA1-213ENST00000519113 CCDC144BQ3MJ40 725 aa22.69■■□□□ 1.22
CTNNA1-213ENST00000519113 PUS7LQ9H0K6 701 aaKnown RBP22.69■■□□□ 1.22
CTNNA1-213ENST00000519113 BAZ2AQ9UIF9 1905 aaKnown RBP22.69■■□□□ 1.22
CTNNA1-213ENST00000519113 CHGBP05060 677 aa22.68■■□□□ 1.22
CTNNA1-213ENST00000519113 RASA1P20936 1047 aa22.68■■□□□ 1.22
CTNNA1-213ENST00000519113 PBX2P40425 430 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms