RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 CHD7Q9P2D1 2997 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 DNAJC25-GNG10A0A024R161 153 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 GOLIM4O00461 696 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 PBX2P40425 430 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 HSP90AB4PQ58FF6 505 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 PSRC1Q6PGN9 363 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 CCDC129Q6ZRS4 1044 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 ZNF467Q7Z7K2 595 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 ITPRIPQ8IWB1 547 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 FTSJ3Q8IY81 847 aaKnown RBP14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 TMEM199Q8N511 208 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 PCSK9Q8NBP7 692 aaKnown RBP14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 TEX13BQ9BXU2 312 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 PRDM12Q9H4Q4 367 aa14.88□□□□□ -0.03
TRAPPC9-204ENST00000518723 MYADML2A6NDP7 307 aa14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 PRKAB2O43741 272 aa14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 CSF2RAP15509 400 aa14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 MRPS5P82675 430 aaKnown RBP14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 RAB30Q15771 203 aa14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 FAM83BQ5T0W9 1011 aa14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 AMOTL1Q8IY63 956 aa14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 RHPN1Q8TCX5 695 aa14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 ADAMTS19Q8TE59 1207 aa14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 UPF3AQ9H1J1 476 aaKnown RBP14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 IL1RAPL2Q9NP60 686 aa14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 COL11A1P12107 1806 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC9-204ENST00000518723 PLXNA1Q9UIW2 1896 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 A0A0U1RQG5 324 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 GRXCR1A8MXD5 290 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 USP17L12C9JPN9 530 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 USP17L21D6R901 530 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 SMIM22K7EJ46 135 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 ARVCFO00192 962 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 ATP2A1O14983 1001 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 MBD4O95243 580 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 ASGR1P07306 291 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 RLBP1P12271 317 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 ADD2P35612 726 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 GJA9P57773 515 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 ADGRE1Q14246 886 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 ZNF365Q70YC5 407 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 FAM126BQ8IXS8 530 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 PPM1EQ8WY54 764 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 DDX11Q96FC9 970 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 DNAJC2Q99543 621 aaKnown RBP14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 SLF1Q9BQI6 1058 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 SPC25Q9HBM1 224 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 ZHX1Q9UKY1 873 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 ZBED9Q6R2W3 1325 aa14.86□□□□□ -0.03
TRAPPC9-204ENST00000518723 XIRP2A4UGR9 3374 aa14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 CYP2D7A0A087X1C5 515 aa14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 ADCY6O43306 1168 aa14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 C6orf222P0C671 652 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 NKX3-2P78367 333 aa14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 ACVR2BQ13705 512 aa14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 SNRNP48Q6IEG0 339 aaKnown RBP14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 CLASRPQ8N2M8 674 aaKnown RBP14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 HERVK_113Q902F9 699 aa14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 UHRF1Q96T88 793 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 ABHD16BQ9H3Z7 469 aa14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 MSRAQ9UJ68 235 aa14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 RIPK3Q9Y572 518 aa14.85□□□□□ -0.03
TRAPPC9-204ENST00000518723 TLR3O15455 904 aaKnown RBP14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 CD4P01730 458 aa14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 IRX5P78411 483 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 CCDC144BQ3MJ40 725 aa14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 MTIF3Q9H2K0 278 aaKnown RBP14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 IL23AQ9NPF7 189 aa14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 PAG1Q9NWQ8 432 aa14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 RAPGEFL1Q9UHV5 662 aa14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 MYH8P13535 1937 aa14.84□□□□□ -0.03
TRAPPC9-204ENST00000518723 MYO9BQ13459 2157 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 CCER2I3L3R5 266 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 RAD21O60216 631 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 IFIT2P09913 472 aaKnown RBP14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 ACRP10323 421 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 PLA2G5P39877 138 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 SLFNL1Q499Z3 407 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 GNASQ5JWF2 1037 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 CTR9Q6PD62 1173 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 PRPF38AQ8NAV1 312 aaKnown RBP14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 VTI1AQ96AJ9 217 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 KIF1BPQ96EK5 621 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 FGD4Q96M96 766 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 PPP1R12CQ9BZL4 782 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 NYAP2Q9P242 653 aa14.83□□□□□ -0.04
TRAPPC9-204ENST00000518723 CTAGE5O15320 804 aa14.82□□□□□ -0.04
TRAPPC9-204ENST00000518723 IGFBP4P22692 258 aa14.82□□□□□ -0.04
TRAPPC9-204ENST00000518723 UBE3CQ15386 1083 aa14.82□□□□□ -0.04
TRAPPC9-204ENST00000518723 SLC43A3Q8NBI5 491 aa14.82□□□□□ -0.04
TRAPPC9-204ENST00000518723 IL27Q8NEV9 243 aa14.82□□□□□ -0.04
TRAPPC9-204ENST00000518723 NUP88Q99567 741 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC9-204ENST00000518723 KATNBL1Q9H079 304 aa14.82□□□□□ -0.04
TRAPPC9-204ENST00000518723 SLC28A3Q9HAS3 691 aa14.82□□□□□ -0.04
TRAPPC9-204ENST00000518723 CXXC1Q9P0U4 656 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms