RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 CATIPQ7Z7H3 387 aa14.68□□□□□ -0.06
IGHV3-6-201ENST00000518407 FAM160B2Q86V87 743 aa14.68□□□□□ -0.06
IGHV3-6-201ENST00000518407 STAG2Q8N3U4 1231 aa14.68□□□□□ -0.06
IGHV3-6-201ENST00000518407 SMCR8Q8TEV9 937 aaPredicted RBP14.68□□□□□ -0.06
IGHV3-6-201ENST00000518407 BRF1Q92994 677 aa14.68□□□□□ -0.06
IGHV3-6-201ENST00000518407 UPF2Q9HAU5 1272 aaKnown RBP14.68□□□□□ -0.06
IGHV3-6-201ENST00000518407 BTBD7Q9P203 1132 aa14.68□□□□□ -0.06
IGHV3-6-201ENST00000518407 RBPJLQ9UBG7 517 aa14.68□□□□□ -0.06
IGHV3-6-201ENST00000518407 CPA4Q9UI42 421 aa14.68□□□□□ -0.06
IGHV3-6-201ENST00000518407 GPR25O00155 361 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 PARP1P09874 1014 aaKnown RBP14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 GOLGA8HP0CJ92 632 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 RCAN1P53805 252 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 APOBRQ0VD83 1088 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 SLC35G1Q2M3R5 365 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 NFXL1Q6ZNB6 911 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 ANKRD13CQ8N6S4 541 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 PRPF38AQ8NAV1 312 aaKnown RBP14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 CHURC1Q8WUH1 139 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 GPCPD1Q9NPB8 672 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 PDRG1Q9NUG6 133 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 HOXC10Q9NYD6 342 aa14.67□□□□□ -0.06
IGHV3-6-201ENST00000518407 KLF18A0A0U1RQI7 1052 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 VWA5AO00534 786 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 CALM1P0DP23 149 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 CALM2P0DP24 149 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 CALM3P0DP25 149 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 RXRAP19793 462 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 SLC16A2P36021 539 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 ERVK-9P63128 1117 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 ERVK-24P63145 666 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 CAP1Q01518 475 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 SYDE2Q5VT97 1194 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 MB21D1Q8N884 522 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 CPVLQ9H3G5 476 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 SLC38A10Q9HBR0 1119 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 ZNF214Q9UL59 606 aaPredicted RBP14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 PRR12Q9ULL5 1215 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 HPS5Q9UPZ3 1129 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 RABGAP1Q9Y3P9 1069 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 SLC12A7Q9Y666 1083 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 HTTP42858 3142 aa14.66□□□□□ -0.06
IGHV3-6-201ENST00000518407 AK2P54819 239 aa14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 TMEM132BQ14DG7 1078 aa14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 Q3C1V9 767 aa14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 MICU3Q86XE3 530 aa14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 RAB11FIP4Q86YS3 637 aa14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 NUP133Q8WUM0 1156 aa14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 ZNF296Q8WUU4 475 aaPredicted RBP14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 KIFC2Q96AC6 838 aa14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 PAGR1Q9BTK6 254 aa14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 RANBP17Q9H2T7 1088 aaKnown RBP14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 FAM217BQ9NTX9 383 aaPredicted RBP14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 ISY1Q9ULR0 285 aaKnown RBP14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 ZNF536O15090 1300 aa14.65□□□□□ -0.06
IGHV3-6-201ENST00000518407 MCM3APO60318 1980 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 KLRF2D3W0D1 207 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 ATP2A1O14983 1001 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 ZBTB43O43298 467 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 CYTH3O43739 400 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 FDX1P10109 184 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 CTGFP29279 349 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 CTCFP49711 727 aaPredicted RBP14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 NEK4P51957 841 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 FGD1P98174 961 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 SP3Q02447 781 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 NBPF11Q86T75 865 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 FANCBQ8NB91 859 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 CTCFLQ8NI51 663 aaPredicted RBP14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 MTMR8Q96EF0 704 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 UBA5Q9GZZ9 404 aa14.64□□□□□ -0.07
IGHV3-6-201ENST00000518407 LRRC37A2A6NM11 1700 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 GOLGA8BA8MQT2 603 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 FKTNO75072 461 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 PLEKHA8P1O95397 391 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 PDIA3P30101 505 aaKnown RBP14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 CDC27P30260 824 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 LACTBP83111 547 aaPredicted RBP14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 IKQ13123 557 aaPredicted RBP14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 RABEP1Q15276 862 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 TMTC3Q6ZXV5 915 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 CCDC144CPQ8IYA2 1237 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 ADGRF4Q8IZF3 695 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 GPRC5AQ8NFJ5 357 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 SPZ1Q9BXG8 430 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 SPATC1LQ9H0A9 340 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 RIOX1Q9H6W3 641 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 CNTNAP5Q8WYK1 1306 aa14.63□□□□□ -0.07
IGHV3-6-201ENST00000518407 GOLGA8AA7E2F4 631 aa14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 SMARCA1P28370 1054 aa14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 KIF5BP33176 963 aa14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 LBX1P52954 281 aa14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 OAZ1P54368 228 aa14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 SNAP25P60880 206 aa14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 FUT2Q10981 343 aa14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 RTN1Q16799 776 aa14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 SRBD1Q8N5C6 995 aaKnown RBP14.62□□□□□ -0.07
IGHV3-6-201ENST00000518407 CD99L2Q8TCZ2 262 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms