RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 NFIAQ12857 509 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 NOGQ13253 232 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 PICALMQ13492 652 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 HDAC1Q13547 482 aaPredicted RBP7.39□□□□□ -1.23
MRPS28-203ENST00000518371 PHTF2Q8N3S3 785 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.39□□□□□ -1.23
MRPS28-203ENST00000518371 AIDAQ96BJ3 306 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 TEPSINQ96N21 525 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 GRIP2Q9C0E4 1043 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 ARHGEF10LQ9HCE6 1279 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 RAB6BQ9NRW1 208 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 ECHDC1Q9NTX5 307 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 FZD1Q9UP38 647 aa7.39□□□□□ -1.23
MRPS28-203ENST00000518371 POLR2AP24928 1970 aaKnown RBP7.39□□□□□ -1.23
MRPS28-203ENST00000518371 ENTPD3O75355 529 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 RGS3P49796 1198 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 KIF23Q02241 960 aaPredicted RBP7.38□□□□□ -1.23
MRPS28-203ENST00000518371 LDLRAD1Q5T700 205 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 SLC9C2Q5TAH2 1124 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 DCAF15Q66K64 600 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 B4GALNT3Q6L9W6 998 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 MIGA2Q7L4E1 593 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 ALYREFQ86V81 257 aaKnown RBP7.38□□□□□ -1.23
MRPS28-203ENST00000518371 TEX11Q8IYF3 940 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 ANKRD13AQ8IZ07 590 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 MAGEB6Q8N7X4 407 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 SH3RF3Q8TEJ3 882 aaPredicted RBP7.38□□□□□ -1.23
MRPS28-203ENST00000518371 ZNF384Q8TF68 577 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 HAUS7Q99871 368 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 IDI2Q9BXS1 227 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 PAG1Q9NWQ8 432 aa7.38□□□□□ -1.23
MRPS28-203ENST00000518371 AATFQ9NY61 560 aaKnown RBP eCLIP7.38□□□□□ -1.23
MRPS28-203ENST00000518371 UNCXA6NJT0 531 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 GPR25O00155 361 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 ERC2O15083 957 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 WDHD1O75717 1129 aaPredicted RBP7.37□□□□□ -1.23
MRPS28-203ENST00000518371 HSPA1AP0DMV8 641 aaKnown RBP7.37□□□□□ -1.23
MRPS28-203ENST00000518371 HSPA1BP0DMV9 641 aaKnown RBP7.37□□□□□ -1.23
MRPS28-203ENST00000518371 RHBDL3P58872 404 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 SNRPNP63162 240 aaKnown RBP7.37□□□□□ -1.23
MRPS28-203ENST00000518371 CLN3Q13286 438 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 MAP3K11Q16584 847 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 DBN1Q16643 649 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 ZSCAN25Q6NSZ9 544 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 FOXR1Q6PIV2 292 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 TMED8Q6PL24 325 aaPredicted RBP7.37□□□□□ -1.23
MRPS28-203ENST00000518371 CYP2U1Q7Z449 544 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 ZFPM1Q8IX07 1006 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 MIGA1Q8NAN2 632 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 TGFBRAP1Q8WUH2 860 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 EDC3Q96F86 508 aaKnown RBP7.37□□□□□ -1.23
MRPS28-203ENST00000518371 GMCL1Q96IK5 515 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 CSRNP1Q96S65 589 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 ZNF341Q9BYN7 854 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.37□□□□□ -1.23
MRPS28-203ENST00000518371 CSADQ9Y600 493 aa7.37□□□□□ -1.23
MRPS28-203ENST00000518371 TTC41PQ6P2S7 1318 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 DDTLA6NHG4 134 aaPredicted RBP7.36□□□□□ -1.23
MRPS28-203ENST00000518371 FAM155AB1AL88 458 aaPredicted RBP7.36□□□□□ -1.23
MRPS28-203ENST00000518371 IL2RAP01589 272 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 IGHDP01880 384 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 PDE6AP16499 860 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 USP5P45974 858 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 DYNLL1P63167 89 aaKnown RBP7.36□□□□□ -1.23
MRPS28-203ENST00000518371 TSHZ3Q63HK5 1081 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 ADGRA1Q86SQ6 560 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 RASAL3Q86YV0 1011 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 CERS3Q8IU89 383 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 MAPKAPK5Q8IW41 473 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 ZNF837Q96EG3 531 aaPredicted RBP7.36□□□□□ -1.23
MRPS28-203ENST00000518371 CLMNQ96JQ2 1002 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 WRNIP1Q96S55 665 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 ZIC5Q96T25 663 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 ELP3Q9H9T3 547 aa7.36□□□□□ -1.23
MRPS28-203ENST00000518371 DDX4Q9NQI0 724 aaKnown RBP7.36□□□□□ -1.23
MRPS28-203ENST00000518371 ZNF646O15015 1829 aaPredicted RBP7.36□□□□□ -1.23
MRPS28-203ENST00000518371 ZNF532Q9HCE3 1301 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 TRPM7Q96QT4 1865 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 OIP5O43482 229 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 STAU1O95793 577 aaKnown RBP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 MX1P20591 662 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 ITGB7P26010 798 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 COL8A1P27658 744 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 CTCFP49711 727 aaPredicted RBP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 LRRFIP1Q32MZ4 808 aaKnown RBP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 SMC5Q8IY18 1101 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 TRIM22Q8IYM9 498 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 OTUD7AQ8TE49 926 aaPredicted RBP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 ZKSCAN4Q969J2 545 aaPredicted RBP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 WNK4Q96J92 1243 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 LNPKQ9C0E8 428 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 OSBPL5Q9H0X9 879 aaPredicted RBP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.35□□□□□ -1.23
MRPS28-203ENST00000518371 GDPD2Q9HCC8 539 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 PRM3Q9NNZ6 103 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 HRH3Q9Y5N1 445 aa7.35□□□□□ -1.23
MRPS28-203ENST00000518371 ARAP2Q8WZ64 1704 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms