RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SH3BP5LQ7L8J4 393 aa30.25■■■□□ 2.43
COL13A1-210ENST00000517713 PSMD1Q99460 953 aa30.25■■■□□ 2.43
COL13A1-210ENST00000517713 SMTNL1A8MU46 457 aa30.24■■■□□ 2.43
COL13A1-210ENST00000517713 DPEP1P16444 411 aa30.24■■■□□ 2.43
COL13A1-210ENST00000517713 KCNA3P22001 575 aa30.24■■■□□ 2.43
COL13A1-210ENST00000517713 C6orf50Q9HD87 102 aa30.24■■■□□ 2.43
COL13A1-210ENST00000517713 SMCO2A6NFE2 343 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 GNA11P29992 359 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 SOGA3Q5TF21 947 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 ARL6IP4Q66PJ3 421 aaKnown RBP30.23■■■□□ 2.43
COL13A1-210ENST00000517713 C4orf32Q8N8J7 132 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 DHX58Q96C10 678 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 MRFAP1L1Q96HT8 127 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 TDRD3Q9H7E2 651 aaKnown RBP30.23■■■□□ 2.43
COL13A1-210ENST00000517713 A0A087X0B3 334 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 PRR29P0C7W0 189 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 CCDC34Q96HJ3 373 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 GPCPD1Q9NPB8 672 aa30.23■■■□□ 2.43
COL13A1-210ENST00000517713 ZNF543Q08ER8 600 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 NT5DC1Q5TFE4 455 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 TRIM34Q9BYJ4 488 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 hCG_1984214I3L0E3 225 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 IKBKBO14920 756 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 TPM4P67936 248 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 ATP2B2Q01814 1243 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 IL17AQ16552 155 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 INF2Q27J81 1249 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 CERKLQ49MI3 558 aaPredicted RBP30.22■■■□□ 2.43
COL13A1-210ENST00000517713 ZNF713Q8N859 430 aaPredicted RBP30.22■■■□□ 2.43
COL13A1-210ENST00000517713 PSME4Q14997 1843 aa30.22■■■□□ 2.43
COL13A1-210ENST00000517713 FAM196BA6NMK8 535 aa30.21■■■□□ 2.43
COL13A1-210ENST00000517713 SARSP49591 514 aaKnown RBP30.21■■■□□ 2.43
COL13A1-210ENST00000517713 KRT25Q7Z3Z0 450 aa30.21■■■□□ 2.43
COL13A1-210ENST00000517713 GRAMD1CQ8IYS0 662 aa30.21■■■□□ 2.43
COL13A1-210ENST00000517713 SMARCE1Q969G3 411 aa30.21■■■□□ 2.43
COL13A1-210ENST00000517713 PRMT6Q96LA8 375 aaPredicted RBP30.21■■■□□ 2.43
COL13A1-210ENST00000517713 MAN1B1Q9UKM7 699 aa30.21■■■□□ 2.43
COL13A1-210ENST00000517713 SLFN14P0C7P3 912 aa30.2■■■□□ 2.43
COL13A1-210ENST00000517713 NCAPHQ15003 741 aa30.2■■■□□ 2.43
COL13A1-210ENST00000517713 ENTPD3O75355 529 aa30.2■■■□□ 2.42
COL13A1-210ENST00000517713 TATDN1Q6P1N9 297 aa30.2■■■□□ 2.42
COL13A1-210ENST00000517713 RSBN1LQ6PCB5 846 aaPredicted RBP30.2■■■□□ 2.42
COL13A1-210ENST00000517713 MYH4Q9Y623 1939 aa30.2■■■□□ 2.42
COL13A1-210ENST00000517713 ESYT2A0FGR8 921 aa30.19■■■□□ 2.42
COL13A1-210ENST00000517713 LARGE2Q8N3Y3 721 aa30.19■■■□□ 2.42
COL13A1-210ENST00000517713 LONP1P36776 959 aaKnown RBP30.18■■■□□ 2.42
COL13A1-210ENST00000517713 GPATCH4Q5T3I0 446 aaKnown RBP30.18■■■□□ 2.42
COL13A1-210ENST00000517713 KCNF1Q9H3M0 494 aa30.18■■■□□ 2.42
COL13A1-210ENST00000517713 ZNF277Q9NRM2 450 aaPredicted RBP30.18■■■□□ 2.42
COL13A1-210ENST00000517713 BMP6P22004 513 aa30.18■■■□□ 2.42
COL13A1-210ENST00000517713 PTGS1P23219 599 aa30.18■■■□□ 2.42
COL13A1-210ENST00000517713 CCDC186Q7Z3E2 898 aa30.18■■■□□ 2.42
COL13A1-210ENST00000517713 FBXO41Q8TF61 875 aa30.18■■■□□ 2.42
COL13A1-210ENST00000517713 KANSL2Q9H9L4 492 aa30.18■■■□□ 2.42
COL13A1-210ENST00000517713 ATRNL1Q5VV63 1379 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 RAD17O75943 681 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 NONOQ15233 471 aaKnown RBP eCLIP30.17■■■□□ 2.42
COL13A1-210ENST00000517713 SH3RF1Q7Z6J0 888 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 ADGRF4Q8IZF3 695 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 TRIML1Q8N9V2 468 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 SPATA20Q8TB22 786 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 PAGE5Q96GU1 130 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 NYAP2Q9P242 653 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 NRBP1Q9UHY1 535 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 CCDC96Q2M329 555 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 MKL1Q969V6 931 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 PYM1Q9BRP8 204 aaKnown RBP30.17■■■□□ 2.42
COL13A1-210ENST00000517713 JMJD4Q9H9V9 463 aa30.17■■■□□ 2.42
COL13A1-210ENST00000517713 SMC2O95347 1197 aa30.16■■■□□ 2.42
COL13A1-210ENST00000517713 VIL1P09327 827 aaKnown RBP30.16■■■□□ 2.42
COL13A1-210ENST00000517713 EEF2P13639 858 aaKnown RBP30.16■■■□□ 2.42
COL13A1-210ENST00000517713 MORC3Q14149 939 aa30.16■■■□□ 2.42
COL13A1-210ENST00000517713 TTBK2Q6IQ55 1244 aa30.16■■■□□ 2.42
COL13A1-210ENST00000517713 PSMD14O00487 310 aa30.15■■■□□ 2.42
COL13A1-210ENST00000517713 MYL5Q02045 173 aa30.15■■■□□ 2.42
COL13A1-210ENST00000517713 COA7Q96BR5 231 aa30.15■■■□□ 2.42
COL13A1-210ENST00000517713 VPS33BQ9H267 617 aa30.15■■■□□ 2.42
COL13A1-210ENST00000517713 PNMA6FA0A0J9YX94 578 aa30.15■■■□□ 2.42
COL13A1-210ENST00000517713 LAD1O00515 517 aa30.15■■■□□ 2.42
COL13A1-210ENST00000517713 AFMP43652 599 aa30.15■■■□□ 2.42
COL13A1-210ENST00000517713 SHROOM1Q2M3G4 852 aaPredicted RBP30.15■■■□□ 2.42
COL13A1-210ENST00000517713 DTHD1Q6ZMT9 781 aa30.15■■■□□ 2.42
COL13A1-210ENST00000517713 IQUBQ8NA54 791 aa30.15■■■□□ 2.42
COL13A1-210ENST00000517713 COL2A1P02458 1487 aaPredicted RBP30.15■■■□□ 2.42
COL13A1-210ENST00000517713 KIF13BQ9NQT8 1826 aa30.14■■■□□ 2.42
COL13A1-210ENST00000517713 KCTD1Q719H9 257 aa30.14■■■□□ 2.42
COL13A1-210ENST00000517713 REXO1Q8N1G1 1221 aaKnown RBP30.14■■■□□ 2.42
COL13A1-210ENST00000517713 MLKLQ8NB16 471 aa30.14■■■□□ 2.42
COL13A1-210ENST00000517713 TMEM60Q9H2L4 133 aa30.14■■■□□ 2.42
COL13A1-210ENST00000517713 E2F4Q16254 413 aa30.13■■■□□ 2.41
COL13A1-210ENST00000517713 TMEM179Q6ZVK1 233 aa30.13■■■□□ 2.41
COL13A1-210ENST00000517713 GMLQ99445 158 aa30.13■■■□□ 2.41
COL13A1-210ENST00000517713 TMOD2Q9NZR1 351 aa30.13■■■□□ 2.41
COL13A1-210ENST00000517713 BIN2Q9UBW5 565 aaPredicted RBP30.13■■■□□ 2.41
COL13A1-210ENST00000517713 DACH1Q9UI36 760 aa30.13■■■□□ 2.41
COL13A1-210ENST00000517713 HDAC9Q9UKV0 1011 aa30.13■■■□□ 2.41
COL13A1-210ENST00000517713 SPDYE2BA6NHP3 402 aa30.13■■■□□ 2.41
COL13A1-210ENST00000517713 SPDYE6P0CI01 402 aa30.13■■■□□ 2.41
COL13A1-210ENST00000517713 SEPT2Q15019 361 aa30.13■■■□□ 2.41
COL13A1-210ENST00000517713 COL4A5P29400 1685 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms