RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SRCIN1Q9C0H9 1055 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 TMX4Q9H1E5 349 aaPredicted RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 UBR3Q6ZT12 1888 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 PTPRCP08575 1304 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 ATP10DQ9P241 1426 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 VIRMAQ69YN4 1812 aaKnown RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 OPLAHO14841 1288 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 PDE8AO60658 829 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 PCCAP05165 728 aaPredicted RBP3.39□□□□□ -1.87
SKP1-204ENST00000517691 ALDH1B1P30837 517 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 AMPD3Q01432 767 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 SLC10A5Q5PT55 438 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 BEND3Q5T5X7 828 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 ZKSCAN2Q63HK3 967 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 STYK1Q6J9G0 422 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 UBE3BQ7Z3V4 1068 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 LSRQ86X29 649 aaPredicted RBP3.39□□□□□ -1.87
SKP1-204ENST00000517691 FTSJ3Q8IY81 847 aaKnown RBP3.39□□□□□ -1.87
SKP1-204ENST00000517691 JDP2Q8WYK2 163 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 NIFKQ9BYG3 293 aaKnown RBP3.39□□□□□ -1.87
SKP1-204ENST00000517691 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 RCAN3Q9UKA8 241 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 CHMP3Q9Y3E7 222 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 RNF123Q5XPI4 1314 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 KIF16BQ96L93 1317 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 TUBGCP6Q96RT7 1819 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 C10orf71Q711Q0 1435 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 H7C1W4 665 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 PLIN1O60240 522 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 WDHD1O75717 1129 aaPredicted RBP3.39□□□□□ -1.87
SKP1-204ENST00000517691 ALDH1L1O75891 902 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 KIF4AO95239 1232 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 CCT4P50991 539 aaKnown RBP3.39□□□□□ -1.87
SKP1-204ENST00000517691 ARID5AQ03989 594 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 CCDC152Q4G0S7 254 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 C4orf46Q504U0 113 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 PRPF40BQ6NWY9 871 aaKnown RBP3.39□□□□□ -1.87
SKP1-204ENST00000517691 MCF2L2Q86YR7 1114 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 TREML1Q86YW5 311 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 RHBDD1Q8TEB9 315 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 ARHGAP45Q92619 1136 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 GNL3LQ9NVN8 582 aaKnown RBP3.39□□□□□ -1.87
SKP1-204ENST00000517691 ABCC12Q96J65 1359 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 PXDNLA1KZ92 1463 aa3.39□□□□□ -1.87
SKP1-204ENST00000517691 LRP5O75197 1615 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 C4AP0C0L4 1744 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 QSER1Q2KHR3 1735 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 LAMB4A4D0S4 1761 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 PNMA6FA0A0J9YX94 578 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 KLRG2A4D1S0 409 aaPredicted RBP3.38□□□□□ -1.87
SKP1-204ENST00000517691 GRM8O00222 908 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 PSPNO60542 156 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 DNAJC6O75061 913 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 BBOX1O75936 387 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 NBPF7P0C2Y1 421 aaPredicted RBP3.38□□□□□ -1.87
SKP1-204ENST00000517691 TRIM27P14373 513 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 USP5P45974 858 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 MAP2K3P46734 347 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 CTSWP56202 376 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 ORC1Q13415 861 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 CRY2Q49AN0 593 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 C4orf17Q53FE4 359 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 TMEM214Q6NUQ4 689 aaKnown RBP3.38□□□□□ -1.87
SKP1-204ENST00000517691 OLFM4Q6UX06 510 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 ATF7IPQ6VMQ6 1270 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 ITPRIPQ8IWB1 547 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 RAVER1Q8IY67 606 aaKnown RBP3.38□□□□□ -1.87
SKP1-204ENST00000517691 DZIP1LQ8IYY4 767 aaKnown RBP3.38□□□□□ -1.87
SKP1-204ENST00000517691 ZNF280CQ8ND82 737 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 GPR152Q8TDT2 470 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 CRAMP1Q96RY5 1269 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 SPC25Q9HBM1 224 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 SEC31BQ9NQW1 1179 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 TNNQ9UQP3 1299 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 PCDHGB7Q9Y5F8 929 aa3.38□□□□□ -1.87
SKP1-204ENST00000517691 IBTKQ9P2D0 1353 aaPredicted RBP3.38□□□□□ -1.87
SKP1-204ENST00000517691 CCDC189A1A4V9 331 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 A6NHS1 94 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 SPINT1O43278 529 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 SORBS3O60504 671 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 MICAL2O94851 1124 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 UBTFL1P0CB47 393 aaPredicted RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 HOXA10P31260 410 aaPredicted RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 ZNF76P36508 570 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 IGHMBP2P38935 993 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 RNF144AP50876 292 aaPredicted RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 RPS8P62241 208 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 RACK1P63244 317 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 PSMD2Q13200 908 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 IFIT5Q13325 482 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 OS9Q13438 667 aaPredicted RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 GRAPQ13588 217 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 GNL2Q13823 731 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 SF3B3Q15393 1217 aaKnown RBP3.37□□□□□ -1.87
SKP1-204ENST00000517691 CCDC57Q2TAC2 916 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 MAP9Q49MG5 647 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 ZNF394Q53GI3 561 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 CCDC93Q567U6 631 aa3.37□□□□□ -1.87
SKP1-204ENST00000517691 SOGA3Q5TF21 947 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms