RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 NACC1Q96RE7 527 aa7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 SLC26A8Q96RN1 970 aa7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 DHRS4Q9BTZ2 278 aa7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 ASPNQ9BXN1 380 aa7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 NCOA5Q9HCD5 579 aaKnown RBP7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 GFOD1Q9NXC2 390 aa7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 TRAV20A0A0B4J274 112 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 SHISA3A0PJX4 238 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 PRODHO43272 600 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 C6orf222P0C671 652 aaPredicted RBP7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 FAM87AP0C7U9 286 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 POU3F3P20264 500 aaPredicted RBP7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 EVA1CP58658 441 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 RNF4P78317 190 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 PABPC4Q13310 644 aaKnown RBP eCLIP7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 TAF7LQ5H9L4 462 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 BEND4Q6ZU67 534 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 APBB1IPQ7Z5R6 666 aaPredicted RBP7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 FERMT3Q86UX7 667 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 TRIM59Q8IWR1 403 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 SCARF2Q96GP6 870 aaPredicted RBP7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 KCNF1Q9H3M0 494 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 BCCIPQ9P287 314 aaKnown RBP eCLIP7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 LRP2BPQ9P2M1 347 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 AKT3Q9Y243 479 aa7.59□□□□□ -1.19
CTNNA1-202ENST00000517533 TRBV23-1A0A0A0MS06 115 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 HMX2A2RU54 273 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 FAM83GA6ND36 823 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 IRS4O14654 1257 aaPredicted RBP7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 PRC1O43663 620 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 EIF3JO75822 258 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 PABPC1P11940 636 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 ETV3P41162 512 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 HSP90AA2PQ14568 343 aaPredicted RBP7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 TM4SF20Q53R12 229 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 CCAR1Q8IX12 1150 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 DTWD2Q8NBA8 298 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 RCC1LQ96I51 464 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 MCMBPQ9BTE3 642 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 GBP3Q9H0R5 595 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 NOL6Q9H6R4 1146 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 FBXL21Q9UKT6 434 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 TPX2Q9ULW0 747 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 PCDHB12Q9Y5F1 795 aa7.58□□□□□ -1.2
CTNNA1-202ENST00000517533 A0A087X0B3 334 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 BLACEA4D250 179 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 AGRPO00253 132 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 CREB3O43889 395 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 DLX3O60479 287 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 VAMP4O75379 141 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 PPM1BO75688 479 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 KCNH1O95259 989 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 VIL1P09327 827 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 NAT2P11245 290 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 FGFR1P11362 822 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 ITGA4P13612 1032 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 SDSP20132 328 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 PPP2R5DQ14738 602 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 NTRK3Q16288 839 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 GTF2IRD2BQ6EKJ0 949 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 GTF2IRD2Q86UP8 949 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 FIBCD1Q8N539 461 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 SYTL5Q8TDW5 730 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 NINJ1Q92982 152 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 YIPF2Q9BWQ6 316 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 FHOD1Q9Y613 1164 aa7.57□□□□□ -1.2
CTNNA1-202ENST00000517533 C1QTNF9BB2RNN3 333 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 PRAMEF1O95521 474 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 CBX7O95931 251 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 CTSKP43235 329 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 PRSS53Q2L4Q9 553 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 DENND5AQ6IQ26 1287 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 NSMFQ6X4W1 530 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 THNSL2Q86YJ6 484 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 JAMLQ86YT9 394 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 SYNPOQ8N3V7 929 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 PRPF38AQ8NAV1 312 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 SLC7A14Q8TBB6 771 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 TSR2Q969E8 191 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 C1orf159Q96HA4 380 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 CDC6Q99741 560 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 TMX1Q9H3N1 280 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 C7orf69Q9H7B7 122 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 EID1Q9Y6B2 187 aa7.56□□□□□ -1.2
CTNNA1-202ENST00000517533 A0A087WZG4 1122 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 FAM170BA6NMN3 283 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 WASH4PA8MWX3 477 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 H0Y8X5 98 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 ARNTLO00327 626 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 RFPL3O75679 317 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 ITGB2P05107 769 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 CDKN1CP49918 316 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 TNK2Q07912 1038 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 ZC3H12BQ5HYM0 836 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 PAOXQ6QHF9 649 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 ZAR1Q86SH2 424 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 CLEC10AQ8IUN9 316 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 SCUBE1Q8IWY4 988 aa7.55□□□□□ -1.2
CTNNA1-202ENST00000517533 NIM1KQ8IY84 436 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms