RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PDE8AO60658 829 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 SASH3O75995 380 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 MYL1P05976 194 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 RFX5P48382 616 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-203ENST00000517490 KIAA0753Q2KHM9 967 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 SGMS1Q86VZ5 419 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 FBXL16Q8N461 479 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 MB21D1Q8N884 522 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 RUBCNQ92622 972 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 DHTKD1Q96HY7 919 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-203ENST00000517490 EPSTI1Q96J88 318 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 TUBGCP2Q9BSJ2 902 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 SAMD15Q9P1V8 674 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 FBXO2Q9UK22 296 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-203ENST00000517490 UBN2Q6ZU65 1347 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 RICTORQ6R327 1708 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 TNKSO95271 1327 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 H3BQF6 201 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 CDC27P30260 824 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 RCAN1P53805 252 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 NAPAP54920 295 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 C2orf54Q08AI8 447 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 E2F4Q16254 413 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 CYB5R4Q7L1T6 521 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 TBC1D10CQ8IV04 446 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 KAZALD1Q96I82 304 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 ZSCAN10Q96SZ4 725 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-203ENST00000517490 MAGEF1Q9HAY2 307 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 ZSWIM5Q9P217 1185 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 ADD3Q9UEY8 706 aaKnown RBP7.4□□□□□ -1.22
CPNE3-203ENST00000517490 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 SALL1Q9NSC2 1324 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 ANKRD65E5RJM6 399 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 CHGBP05060 677 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 GNA11P29992 359 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 PRPHP41219 470 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 PRPF4BQ13523 1007 aaKnown RBP7.4□□□□□ -1.22
CPNE3-203ENST00000517490 SAMM50Q9Y512 469 aa7.4□□□□□ -1.22
CPNE3-203ENST00000517490 KRT79Q5XKE5 535 aa7.4□□□□□ -1.23
CPNE3-203ENST00000517490 RRAGAQ7L523 313 aa7.4□□□□□ -1.23
CPNE3-203ENST00000517490 ZBTB38Q8NAP3 1195 aaPredicted RBP7.4□□□□□ -1.23
CPNE3-203ENST00000517490 CCDC43Q96MW1 224 aaKnown RBP7.4□□□□□ -1.23
CPNE3-203ENST00000517490 NCAPGQ9BPX3 1015 aa7.4□□□□□ -1.23
CPNE3-203ENST00000517490 MTA3Q9BTC8 594 aa7.4□□□□□ -1.23
CPNE3-203ENST00000517490 YY1AP1Q9H869 796 aa7.4□□□□□ -1.23
CPNE3-203ENST00000517490 NHEJ1Q9H9Q4 299 aaPredicted RBP7.4□□□□□ -1.23
CPNE3-203ENST00000517490 LIMA1Q9UHB6 759 aaKnown RBP7.4□□□□□ -1.23
CPNE3-203ENST00000517490 RAB21Q9UL25 225 aa7.4□□□□□ -1.23
CPNE3-203ENST00000517490 HPS5Q9UPZ3 1129 aa7.4□□□□□ -1.23
CPNE3-203ENST00000517490 hCG_1642624A0A1W2PR95 340 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 B4DLN1 442 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 DDAH1O94760 285 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 CLNS1AP54105 237 aaKnown RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 ARID5AQ03989 594 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 SPTY2D1Q68D10 685 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 WDR93Q6P2C0 686 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 ATG9AQ7Z3C6 839 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 ILDR1Q86SU0 546 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 LY9Q9HBG7 655 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 FAM207AQ9NSI2 230 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 SLIT1O75093 1534 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 MAP3K15Q6ZN16 1313 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 LGALS16A8MUM7 142 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 ERVV-2B6SEH9 535 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 SLC8A1P32418 973 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 GUCY2FP51841 1108 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 TBX2Q13207 712 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 NNTQ13423 1086 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 PTPAQ15257 358 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 RPS6KA1Q15418 735 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 GLE1Q53GS7 698 aaKnown RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 TTC19Q6DKK2 380 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 CROCCP2Q86T23 111 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 CABP7Q86V35 215 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 CACNA2D3Q8IZS8 1091 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 MSL3Q8N5Y2 521 aaKnown RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 PNKPQ96T60 521 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 SELENOSQ9BQE4 189 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 CUEDC2Q9H467 287 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 PPANQ9NQ55 473 aaKnown RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 MAP2K7O14733 419 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 PRPF3O43395 683 aaKnown RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 COBLO75128 1261 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 PRDM1O75626 825 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 KIF4AO95239 1232 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 GUCY2CP25092 1073 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 CTSWP56202 376 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 NAA25Q14CX7 972 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 ALX1Q15699 326 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 SFMBT2Q5VUG0 894 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 HOOK3Q86VS8 718 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 CNOT6LQ96LI5 555 aaKnown RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 ACTR5Q9H9F9 607 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-203ENST00000517490 HPCAL4Q9UM19 191 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 A0A1W2PQC6 194 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 CLGNO14967 610 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 PDE8BO95263 885 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 TSPY3P0CV98 308 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 TSPY8P0CW00 308 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 PCP11498 1178 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms