RNA–Protein interactions for RNA: ENST00000517315.1

NSMCE2-202, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3 BASIC

Gene NSMCE2, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-202ENST00000517315 RNF123Q5XPI4 1314 aa7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 MYH14Q7Z406 1995 aaKnown RBP7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 PLSCR1O15162 318 aa7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 DDX58O95786 925 aaKnown RBP7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 PDE3AQ14432 1141 aa7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 PROSER3Q2NL68 480 aa7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 COPS6Q7L5N1 327 aa7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 ARMC10Q8N2F6 343 aa7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 XAGE3Q8WTP9 111 aa7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 USP26Q9BXU7 913 aa7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 RNF208Q9H0X6 261 aa7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 CLEC4MQ9H2X3 399 aaPredicted RBP7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 COL5A3P25940 1745 aaPredicted RBP7.34□□□□□ -1.23
NSMCE2-202ENST00000517315 TNS1Q9HBL0 1735 aaKnown RBP7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 LOC100289279A0A1B0GTE1 492 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 GADD45BO75293 160 aaPredicted RBP7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 TRIM27P14373 513 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 CRKLP46109 303 aaKnown RBP7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 GSTM4Q03013 218 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 TXNRD1Q16881 649 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 ZNF423Q2M1K9 1284 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 SLC4A10Q6U841 1118 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 KIF6Q6ZMV9 814 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 LINC00116Q8NCU8 138 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 PANK1Q8TE04 598 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 FAM46AQ96IP4 442 aaKnown RBP7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 ZBTB1Q9Y2K1 713 aa7.33□□□□□ -1.24
NSMCE2-202ENST00000517315 CICQ96RK0 1608 aaPredicted RBP7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 A0A087WZG4 1122 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 PI4KAP2A4QPH2 592 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 ITPKAP23677 461 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 IL6STP40189 918 aaPredicted RBP7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 PREPP48147 710 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 DSC3Q14574 896 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 UVSSAQ2YD98 709 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 C20orf194Q5TEA3 1177 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 ANKRD34AQ69YU3 496 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 INTS5Q6P9B9 1019 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 KSR2Q6VAB6 950 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 PI4KAP1Q8N8J0 262 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 EPS8L3Q8TE67 593 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 UTP4Q969X6 686 aaKnown RBP7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 CRBNQ96SW2 442 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 ZNF576Q9H609 170 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 ABCB6Q9NP58 842 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 TNNQ9UQP3 1299 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
NSMCE2-202ENST00000517315 NUP98P52948 1817 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 AFDNP55196 1824 aaKnown RBP7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 CNTNAP4Q9C0A0 1308 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 MEGF11A6BM72 1044 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 F6X3S4 739 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 DHX15O43143 795 aaKnown RBP7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 TREHO43280 583 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 SART1O43290 800 aaKnown RBP7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 RPS6KA4O75676 772 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 DLGAP3O95886 979 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 C4BP0C0L5 1744 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 CCT4P50991 539 aaKnown RBP7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 NEXNQ0ZGT2 675 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 EZH2Q15910 746 aaKnown RBP7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 PRPF40BQ6NWY9 871 aaKnown RBP7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 FDX2Q6P4F2 183 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 TTLL7Q6ZT98 887 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 ITPRIPQ8IWB1 547 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 Q8N3U1 123 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 TMEM57Q8N5G2 664 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 PLBD2Q8NHP8 589 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 DNAAF4Q8WXU2 420 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 NRSN2Q9GZP1 204 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 CHMP4BQ9H444 224 aaKnown RBP7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 MAP3K2Q9Y2U5 619 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 RGPD3A6NKT7 1758 aaPredicted RBP7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 RGPD4Q7Z3J3 1758 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 ARFGEF2Q9Y6D5 1785 aa7.31□□□□□ -1.24
NSMCE2-202ENST00000517315 RLBP1P12271 317 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 FSTP19883 344 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 EIF5P55010 431 aaKnown RBP7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 PLCB3Q01970 1234 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 GRM2Q14416 872 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 MVPQ14764 893 aaKnown RBP7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 PI16Q6UXB8 463 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 LRP10Q7Z4F1 713 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 GLIS3Q8NEA6 775 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 EXOC6Q8TAG9 804 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 MYRFLQ96LU7 910 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 PSMG3-AS1Q96PY0 264 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 MYD88Q99836 296 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 TMPRSS13Q9BYE2 586 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 SRCIN1Q9C0H9 1055 aa7.3□□□□□ -1.24
NSMCE2-202ENST00000517315 ABCC4O15439 1325 aa7.29□□□□□ -1.24
NSMCE2-202ENST00000517315 RREB1Q92766 1687 aa7.29□□□□□ -1.24
NSMCE2-202ENST00000517315 PNMA6FA0A0J9YX94 578 aa7.29□□□□□ -1.24
NSMCE2-202ENST00000517315 TMEM238LA0A1B0GVL6 79 aa7.29□□□□□ -1.24
NSMCE2-202ENST00000517315 B3GALT4O96024 378 aa7.29□□□□□ -1.24
NSMCE2-202ENST00000517315 RFC4P35249 363 aa7.29□□□□□ -1.24
NSMCE2-202ENST00000517315 INTS3Q68E01 1043 aaKnown RBP7.29□□□□□ -1.24
NSMCE2-202ENST00000517315 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.29□□□□□ -1.24
NSMCE2-202ENST00000517315 DEFB132Q7Z7B7 95 aa7.29□□□□□ -1.24
NSMCE2-202ENST00000517315 CAMKK2Q96RR4 588 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms