RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SPDYE2BA6NHP3 402 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 TLR3O15455 904 aaKnown RBP4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 SEPT4O43236 478 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 ASGR2P07307 311 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 SPDYE6P0CI01 402 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 SRFP11831 508 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 MYF5P13349 255 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 ATF7P17544 494 aaPredicted RBP4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 GPTP24298 496 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 INPP5BP32019 993 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 GCLCP48506 637 aaPredicted RBP4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 COASYQ13057 564 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 ADAM15Q13444 863 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 STRIP1Q5VSL9 837 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 HDGFL2Q7Z4V5 671 aaPredicted RBP4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 PPARGC1BQ86YN6 1023 aaKnown RBP4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 DCAF11Q8TEB1 546 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 ZBED2Q9BTP6 218 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 WNT8AQ9H1J5 351 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 PRORYQ9H606 182 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 JADE2Q9NQC1 790 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 CLEC1BQ9P126 229 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 MAN2B2Q9Y2E5 1009 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 KIF16BQ96L93 1317 aa4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 LILRB3O75022 631 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 ACTN1P12814 892 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 ABCG1P45844 678 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 CDK7P50613 346 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 ATP2B2Q01814 1243 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 CSTF1Q05048 431 aaKnown RBP4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 GPM6BQ13491 265 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 CFAP100Q494V2 611 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 SH3PXD2AQ5TCZ1 1133 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 DEFB128Q7Z7B8 93 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 RNF180Q86T96 592 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 TICAM1Q8IUC6 712 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 FAM126BQ8IXS8 530 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 TTC5Q8N0Z6 440 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 TDRD7Q8NHU6 1098 aaKnown RBP4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 NUP133Q8WUM0 1156 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 CELF1Q92879 486 aaKnown RBP4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 EDC3Q96F86 508 aaKnown RBP4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 SEMA4CQ9C0C4 833 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 XPNPEP3Q9NQH7 507 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 RNF216Q9NWF9 866 aaPredicted RBP4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 ZSCAN32Q9NX65 697 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 DLGAP2Q9P1A6 1054 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 DNMT3LQ9UJW3 386 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 FBXO4Q9UKT5 387 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 COL11A1P12107 1806 aaPredicted RBP4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 ADGRG4Q8IZF6 3080 aa4.41□□□□□ -1.7
SCARNA13-201ENST00000516672 ANKRD36CQ5JPF3 1778 aa4.4□□□□□ -1.7
SCARNA13-201ENST00000516672 ATRQ13535 2644 aa4.4□□□□□ -1.7
SCARNA13-201ENST00000516672 A0A087WV48 116 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 TCP10L2B9ZVM9 353 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 H3BNC9 293 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 PEX10O60683 326 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 PGK1P00558 417 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 PFKMP08237 780 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 C6P13671 934 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 RFX1P22670 979 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 KLRK1P26718 216 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 ADSSP30520 456 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 CACNB1Q02641 598 aaPredicted RBP4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 SF3A2Q15428 464 aaKnown RBP4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 TAF1BQ53T94 588 aaPredicted RBP4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 SLC10A5Q5PT55 438 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 TREML2Q5T2D2 321 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 GPR142Q7Z601 462 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 C12orf50Q8NA57 414 aaPredicted RBP4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 STAC3Q96MF2 364 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 CRBNQ96SW2 442 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 MDFIQ99750 246 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 LGR6Q9HBX8 967 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 TSHZ2Q9NRE2 1034 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 PODXL2Q9NZ53 605 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 MORF4L1Q9UBU8 362 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 GGA1Q9UJY5 639 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 FBXL21Q9UKT6 434 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 PNMA3Q9UL41 463 aa4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.4□□□□□ -1.71
SCARNA13-201ENST00000516672 PDZD2O15018 2839 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 CD4P01730 458 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 MAPK4P31152 587 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 ACLYP53396 1101 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 AMOTQ4VCS5 1084 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 PLEKHH3Q7Z736 793 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 SPATA3Q8NHX4 192 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 GAS2L2Q8NHY3 880 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 SUSD6Q92537 303 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 ZNF428Q96B54 188 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 FCRL3Q96P31 734 aaPredicted RBP4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 LRRC4CQ9HCJ2 640 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 ANKIB1Q9P2G1 1089 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 ZNF70Q9UC06 446 aaPredicted RBP4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 PLEKHB1Q9UF11 243 aaPredicted RBP4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 AGTPBP1Q9UPW5 1226 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 CELSR1Q9NYQ6 3014 aa4.39□□□□□ -1.71
SCARNA13-201ENST00000516672 PTPRSQ13332 1948 aa4.38□□□□□ -1.71
SCARNA13-201ENST00000516672 MTORP42345 2549 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms