RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 KIR2DL2P43627 348 aaPredicted RBP0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 SMAD4Q13485 552 aaKnown RBP0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 SLBPQ14493 270 aaKnown RBP eCLIP0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 KANK4Q5T7N3 995 aaPredicted RBP0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 AGBL4Q5VU57 503 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 SLFN13Q68D06 897 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 SP5Q6BEB4 398 aaPredicted RBP0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 KRTAP5-7Q6L8G8 165 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 LETMD1Q6P1Q0 360 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 LRFN4Q6PJG9 635 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 B3GNT8Q7Z7M8 397 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 DDX54Q8TDD1 881 aaKnown RBP0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 EDAQ92838 391 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZBTB8AQ96BR9 441 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 HHIPL1Q96JK4 782 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 ZNF778Q96MU6 729 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 SAP130Q9H0E3 1048 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 R3HDMLQ9H3Y0 253 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 SYNPO2LQ9H987 977 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 MTMR4Q9NYA4 1195 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 CSADQ9Y600 493 aa0.72□□□□□ -2.29
RNU6-542P-201ENST00000516405 TMEM191CA6NGB0 347 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZBTB39O15060 712 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 GAS8-AS1O95177 125 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 ASGR2P07307 311 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 NCAM1P13591 858 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 BRD2P25440 801 aaKnown RBP0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 CLK3P49761 638 aaKnown RBP0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 SEC13P55735 322 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 HS1BP3Q53T59 392 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZBTB37Q5TC79 503 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 PDZD3Q86UT5 571 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 CCNJLQ8IV13 435 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 REXO1Q8N1G1 1221 aaKnown RBP0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 NFATC2IPQ8NCF5 419 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZC3H15Q8WU90 426 aaKnown RBP0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 MBD6Q96DN6 1003 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 MAP6Q96JE9 813 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 TCF12Q99081 682 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 C1QTNF7Q9BXJ2 289 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 RNF38Q9H0F5 515 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 VPS33BQ9H267 617 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 TRIT1Q9H3H1 467 aaKnown RBP0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 FBRSQ9HAH7 460 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 JADE2Q9NQC1 790 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 SNRKQ9NRH2 765 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 FAM13BQ9NYF5 915 aa0.71□□□□□ -2.3
RNU6-542P-201ENST00000516405 A6NHS1 94 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 TNFRSF10BO14763 440 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 FOXO3O43524 673 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 EDN3P14138 238 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 RPL13P26373 211 aaKnown RBP0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 WEE1P30291 646 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 ARL4AP40617 200 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF81P51508 661 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 RTP1P59025 263 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 NKG7Q16617 165 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 KRTAP21-2Q3LI59 83 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 MBNL2Q5VZF2 373 aaKnown RBP0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 TCTN3Q6NUS6 607 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 FBXL22Q6P050 247 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 Q6ZSN1 163 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 HDGFL2Q7Z4V5 671 aaPredicted RBP0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 PLEKHH3Q7Z736 793 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 CDH24Q86UP0 819 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 C12orf40Q86WS4 652 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 FIBCD1Q8N539 461 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 LINC00482Q8N8I6 264 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 SMRP1Q8NCR6 262 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 SMARCC2Q8TAQ2 1214 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 TMEM255BQ8WV15 326 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 PMEPA1Q969W9 287 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 NUDT16Q96DE0 195 aaKnown RBP0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 LCORQ96JN0 433 aaPredicted RBP0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 COX4I2Q96KJ9 171 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 GNRHR2Q96P88 292 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 SLC29A3Q9BZD2 475 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF576Q9H609 170 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 GPATCH2Q9NW75 528 aa0.7□□□□□ -2.3
RNU6-542P-201ENST00000516405 PRKCAP17252 672 aa0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 RPL10P27635 214 aaKnown RBP0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF157P51786 506 aaPredicted RBP0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 CYP4F8P98187 520 aa0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 HYAL1Q12794 435 aa0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 LAPTM5Q13571 262 aa0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 HSF5Q4G112 596 aaPredicted RBP0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 ZNF746Q6NUN9 644 aaPredicted RBP0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 ARHGEF18Q6ZSZ5 1173 aa0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 CDC37L1Q7L3B6 337 aa0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 RD3Q7Z3Z2 195 aa0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 SYT3Q9BQG1 590 aa0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 FAM117AQ9C073 453 aa0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 REXO2Q9Y3B8 237 aaKnown RBP0.69□□□□□ -2.3
RNU6-542P-201ENST00000516405 TMEM82A0PJX8 343 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 DCDC2CA8MYV0 355 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 KRTAP4-16G5E9R7 235 aaPredicted RBP0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 DDX3XO00571 662 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 KIAA0355O15063 1070 aa0.68□□□□□ -2.3
RNU6-542P-201ENST00000516405 FANCGO15287 622 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms