RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 OGFOD1Q8N543 542 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 CNNM3Q8NE01 707 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 KANSL2Q9H9L4 492 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 CCDC39Q9UFE4 941 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 TUBE1Q9UJT0 475 aa17.64■□□□□ 0.41
THUMPD3-210ENST00000515662 POLR2DO15514 142 aaKnown RBP17.63■□□□□ 0.41
THUMPD3-210ENST00000515662 DLGAP5Q15398 846 aa17.63■□□□□ 0.41
THUMPD3-210ENST00000515662 ZRSR1Q15695 479 aaKnown RBP17.63■□□□□ 0.41
THUMPD3-210ENST00000515662 MKL1Q969V6 931 aa17.63■□□□□ 0.41
THUMPD3-210ENST00000515662 TMOD2Q9NZR1 351 aa17.63■□□□□ 0.41
THUMPD3-210ENST00000515662 NYAP2Q9P242 653 aa17.63■□□□□ 0.41
THUMPD3-210ENST00000515662 EEF2P13639 858 aaKnown RBP17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 MCM7P33993 719 aa17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 NLRP12P59046 1061 aa17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 PNOCQ13519 176 aa17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 NAT10Q9H0A0 1025 aaKnown RBP17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 C6orf50Q9HD87 102 aa17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 MYH4Q9Y623 1939 aa17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 SMCO2A6NFE2 343 aa17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 DPCR1Q3MIW9 517 aa17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 GPATCH4Q5T3I0 446 aaKnown RBP17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 TMEM179Q6ZVK1 233 aa17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 DHX40Q8IX18 779 aaKnown RBP17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 AGBL3Q8NEM8 1001 aa17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 ZNF70Q9UC06 446 aaPredicted RBP17.62■□□□□ 0.41
THUMPD3-210ENST00000515662 CLRN2A0PK11 232 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 TCP10L2B9ZVM9 353 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 hCG_1984214I3L0E3 225 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 BIN1O00499 593 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 GNA11P29992 359 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 MDM2Q00987 491 aaPredicted RBP17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 SIAH1Q8IUQ4 282 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 ZNF713Q8N859 430 aaPredicted RBP17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 C4orf32Q8N8J7 132 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 EPSTI1Q96J88 318 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 CSRNP1Q96S65 589 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 ESYT2A0FGR8 921 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 CXCL9Q07325 125 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 SEPT2Q15019 361 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 ABCB5Q2M3G0 1257 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 TTBK2Q6IQ55 1244 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 ZSCAN30Q86W11 494 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 JMJD4Q9H9V9 463 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 SERTAD1Q9UHV2 236 aa17.61■□□□□ 0.41
THUMPD3-210ENST00000515662 VWA3AA6NCI4 1184 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 GOLGA6L19H0YKK7 550 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 ACTN4O43707 911 aaKnown RBP17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 GDF11O95390 407 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 PTMAP06454 111 aaKnown RBP17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 CCDC96Q2M329 555 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 SPDYE2Q495Y8 402 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 ADGRF4Q8IZF3 695 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 BPIFA3Q9BQP9 254 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 TAOK3Q9H2K8 898 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 HOOK1Q9UJC3 728 aaKnown RBP17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 BRCA1P38398 1863 aaKnown RBP17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 FOXN1O15353 648 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 IL17AQ16552 155 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 INF2Q27J81 1249 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 KRT25Q7Z3Z0 450 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 PDILTQ8N807 584 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 MTMR14Q8NCE2 650 aa17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 SYMPKQ92797 1274 aaKnown RBP17.6■□□□□ 0.41
THUMPD3-210ENST00000515662 JAG1P78504 1218 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 ICA1Q05084 483 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 R3HDM1Q15032 1099 aaKnown RBP17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 ARL6IP4Q66PJ3 421 aaKnown RBP17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 KCTD1Q719H9 257 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 FAM151AQ8WW52 585 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 HERC5Q9UII4 1024 aaKnown RBP17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 CNTNAP1P78357 1384 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 FER1L6Q2WGJ9 1857 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 A0A087X0B3 334 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 PNMA6FA0A0J9YX94 578 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 BECN2A8MW95 431 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 DCAF4Q8WV16 495 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 PPP1R1BQ9UD71 204 aaPredicted RBP17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 PCDHA5Q9Y5H7 936 aa17.59■□□□□ 0.41
THUMPD3-210ENST00000515662 NFKBIEO00221 500 aa17.58■□□□□ 0.41
THUMPD3-210ENST00000515662 SLC16A2P36021 539 aa17.58■□□□□ 0.41
THUMPD3-210ENST00000515662 POSTNQ15063 836 aa17.58■□□□□ 0.41
THUMPD3-210ENST00000515662 RBM26Q5T8P6 1007 aaKnown RBP17.58■□□□□ 0.41
THUMPD3-210ENST00000515662 SLFN13Q68D06 897 aa17.58■□□□□ 0.41
THUMPD3-210ENST00000515662 KANK3Q6NY19 840 aa17.58■□□□□ 0.41
THUMPD3-210ENST00000515662 AOPEPQ8N6M6 819 aa17.58■□□□□ 0.41
THUMPD3-210ENST00000515662 COA7Q96BR5 231 aa17.58■□□□□ 0.41
THUMPD3-210ENST00000515662 MTMR8Q96EF0 704 aa17.58■□□□□ 0.41
THUMPD3-210ENST00000515662 GH2P01242 217 aa17.58■□□□□ 0.4
THUMPD3-210ENST00000515662 NONOQ15233 471 aaKnown RBP eCLIP17.58■□□□□ 0.4
THUMPD3-210ENST00000515662 FKBP1CQ5VVH2 108 aa17.58■□□□□ 0.4
THUMPD3-210ENST00000515662 REXO1Q8N1G1 1221 aaKnown RBP17.58■□□□□ 0.4
THUMPD3-210ENST00000515662 SGIP1Q9BQI5 828 aa17.58■□□□□ 0.4
THUMPD3-210ENST00000515662 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.58■□□□□ 0.4
THUMPD3-210ENST00000515662 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.58■□□□□ 0.4
THUMPD3-210ENST00000515662 USP17L10C9JJH3 530 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 PPP1R11O60927 126 aaPredicted RBP17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 ZNF75DP51815 510 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 CIAPIN1Q6FI81 312 aa17.57■□□□□ 0.4
THUMPD3-210ENST00000515662 ISM2Q6H9L7 571 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms