RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 LRRC41Q15345 812 aa12.14□□□□□ -0.47
LINC01843-201ENST00000515627 SNRNP48Q6IEG0 339 aaKnown RBP12.14□□□□□ -0.47
LINC01843-201ENST00000515627 ZNF444Q8N0Y2 327 aaPredicted RBP12.14□□□□□ -0.47
LINC01843-201ENST00000515627 ARRDC4Q8NCT1 418 aa12.14□□□□□ -0.47
LINC01843-201ENST00000515627 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
LINC01843-201ENST00000515627 LENG1Q96BZ8 264 aaPredicted RBP12.14□□□□□ -0.47
LINC01843-201ENST00000515627 TINF2Q9BSI4 451 aa12.14□□□□□ -0.47
LINC01843-201ENST00000515627 TEX13BQ9BXU2 312 aa12.14□□□□□ -0.47
LINC01843-201ENST00000515627 DIS3Q9Y2L1 958 aaKnown RBP12.14□□□□□ -0.47
LINC01843-201ENST00000515627 TACC3Q9Y6A5 838 aa12.14□□□□□ -0.47
LINC01843-201ENST00000515627 DNAJC25-GNG10A0A024R161 153 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 ATP2A1O14983 1001 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 TTLL1O95922 423 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 COPB2P35606 906 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 VPS53Q5VIR6 699 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 SLC39A5Q6ZMH5 540 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 CPXCR1Q8N123 301 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 PRPF38AQ8NAV1 312 aaKnown RBP12.13□□□□□ -0.47
LINC01843-201ENST00000515627 GMCL1P1Q8NEA9 526 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 FGD4Q96M96 766 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 INCENPQ9NQS7 918 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 NRBP1Q9UHY1 535 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
LINC01843-201ENST00000515627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC01843-201ENST00000515627 KBTBD13C9JR72 458 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 SNAI1O95863 264 aaPredicted RBP12.12□□□□□ -0.47
LINC01843-201ENST00000515627 PGK1P00558 417 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 ADCYAP1R1P41586 468 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 TFAP4Q01664 338 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 LRRFIP1Q32MZ4 808 aaKnown RBP12.12□□□□□ -0.47
LINC01843-201ENST00000515627 TRIM60Q495X7 471 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 Q7L0L9 218 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 FERMT2Q96AC1 680 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 NAPBQ9H115 298 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 ZNF287Q9HBT7 754 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 RAVER2Q9HCJ3 691 aaKnown RBP12.12□□□□□ -0.47
LINC01843-201ENST00000515627 XPNPEP3Q9NQH7 507 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 PHF24Q9UPV7 400 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
LINC01843-201ENST00000515627 DNAH12Q6ZR08 3092 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 NMT2O60551 498 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 ADAMTS4O75173 837 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 CTDSPL2Q05D32 466 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 PDE4BQ07343 736 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
LINC01843-201ENST00000515627 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 SLFN13Q68D06 897 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 MAMDC4Q6UXC1 1216 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC01843-201ENST00000515627 SH3RF1Q7Z6J0 888 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 FEM1BQ9UK73 627 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 ZNF536O15090 1300 aa12.11□□□□□ -0.47
LINC01843-201ENST00000515627 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 ADCY6O43306 1168 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 RARBP10826 455 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 BMP3P12645 472 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 AKR1A1P14550 325 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 PDE1AP54750 535 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 C1orf53Q5VUE5 145 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 MSL3Q8N5Y2 521 aaKnown RBP12.1□□□□□ -0.47
LINC01843-201ENST00000515627 DEFB123Q8N688 67 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
LINC01843-201ENST00000515627 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 PDLIM7Q9NR12 457 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 MCM3APO60318 1980 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 SYNGAP1Q96PV0 1343 aa12.1□□□□□ -0.47
LINC01843-201ENST00000515627 A0A0D9SFI3 127 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 MYADML2A6NDP7 307 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 TMEM232C9JQI7 657 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 ZBED4O75132 1171 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 ITGB8P26012 769 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 NOVP48745 357 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 OAZ1P54368 228 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 IRX5P78411 483 aaPredicted RBP12.09□□□□□ -0.47
LINC01843-201ENST00000515627 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
LINC01843-201ENST00000515627 CHMP4CQ96CF2 233 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 DDX11Q96FC9 970 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 GMCL1Q96IK5 515 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 FAM227BQ96M60 508 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 LBHD1Q9BQE6 289 aaPredicted RBP12.09□□□□□ -0.47
LINC01843-201ENST00000515627 KATNBL1Q9H079 304 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
LINC01843-201ENST00000515627 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
LINC01843-201ENST00000515627 SYNRGQ9UMZ2 1314 aa12.09□□□□□ -0.47
LINC01843-201ENST00000515627 A0A1W2PQ45 241 aaPredicted RBP12.08□□□□□ -0.48
LINC01843-201ENST00000515627 A0A1W2PQY0 241 aa12.08□□□□□ -0.48
LINC01843-201ENST00000515627 SLC3A2P08195 630 aaKnown RBP12.08□□□□□ -0.48
LINC01843-201ENST00000515627 FGRP09769 529 aa12.08□□□□□ -0.48
LINC01843-201ENST00000515627 MCCP23508 829 aa12.08□□□□□ -0.48
LINC01843-201ENST00000515627 STAT2P52630 851 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms