RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 GNASQ5JWF2 1037 aa16.51■□□□□ 0.23
SMAD1-216ENST00000515527 CRACR2BQ8N4Y2 399 aaPredicted RBP16.51■□□□□ 0.23
SMAD1-216ENST00000515527 RUNDC1Q96C34 613 aa16.51■□□□□ 0.23
SMAD1-216ENST00000515527 RPAP3Q9H6T3 665 aaPredicted RBP16.51■□□□□ 0.23
SMAD1-216ENST00000515527 DENND2AQ9ULE3 1009 aa16.51■□□□□ 0.23
SMAD1-216ENST00000515527 GPR75-ASB3A0A0A6YYF3 556 aa16.5■□□□□ 0.23
SMAD1-216ENST00000515527 LCHNA4D1U4 455 aa16.5■□□□□ 0.23
SMAD1-216ENST00000515527 DUSP11O75319 330 aaKnown RBP16.5■□□□□ 0.23
SMAD1-216ENST00000515527 LPIN2Q92539 896 aa16.5■□□□□ 0.23
SMAD1-216ENST00000515527 RALYQ9UKM9 306 aaKnown RBP16.5■□□□□ 0.23
SMAD1-216ENST00000515527 ANKRD11Q6UB99 2663 aaPredicted RBP16.5■□□□□ 0.23
SMAD1-216ENST00000515527 SIPA1L1O43166 1804 aa16.49■□□□□ 0.23
SMAD1-216ENST00000515527 PGK2P07205 417 aa16.49■□□□□ 0.23
SMAD1-216ENST00000515527 ZXDAP98168 799 aa16.49■□□□□ 0.23
SMAD1-216ENST00000515527 AGBL1Q96MI9 1066 aa16.49■□□□□ 0.23
SMAD1-216ENST00000515527 TRPV6Q9H1D0 765 aa16.49■□□□□ 0.23
SMAD1-216ENST00000515527 ZHX1Q9UKY1 873 aaPredicted RBP16.49■□□□□ 0.23
SMAD1-216ENST00000515527 ZNF292O60281 2723 aa16.49■□□□□ 0.23
SMAD1-216ENST00000515527 SIP14410 1827 aa16.48■□□□□ 0.23
SMAD1-216ENST00000515527 CALD1Q05682 793 aaKnown RBP16.48■□□□□ 0.23
SMAD1-216ENST00000515527 BEND3Q5T5X7 828 aa16.48■□□□□ 0.23
SMAD1-216ENST00000515527 FRMD5Q7Z6J6 570 aa16.48■□□□□ 0.23
SMAD1-216ENST00000515527 PABPC5Q96DU9 382 aaKnown RBP16.48■□□□□ 0.23
SMAD1-216ENST00000515527 TGS1Q96RS0 853 aaKnown RBP16.48■□□□□ 0.23
SMAD1-216ENST00000515527 ZBED2Q9BTP6 218 aa16.48■□□□□ 0.23
SMAD1-216ENST00000515527 DNAJC18Q9H819 358 aa16.48■□□□□ 0.23
SMAD1-216ENST00000515527 GH2P01242 217 aa16.47■□□□□ 0.23
SMAD1-216ENST00000515527 PUM1Q14671 1186 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMAD1-216ENST00000515527 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
SMAD1-216ENST00000515527 SUCLG2Q96I99 432 aa16.47■□□□□ 0.23
SMAD1-216ENST00000515527 MMP19Q99542 508 aa16.47■□□□□ 0.23
SMAD1-216ENST00000515527 DHX36Q9H2U1 1008 aaKnown RBP16.47■□□□□ 0.23
SMAD1-216ENST00000515527 HOXC10Q9NYD6 342 aa16.47■□□□□ 0.23
SMAD1-216ENST00000515527 F6X3S4 739 aa16.46■□□□□ 0.23
SMAD1-216ENST00000515527 SEMA3EO15041 775 aa16.46■□□□□ 0.23
SMAD1-216ENST00000515527 GALR2O43603 387 aaPredicted RBP16.46■□□□□ 0.23
SMAD1-216ENST00000515527 B4GALT4O60513 344 aa16.46■□□□□ 0.23
SMAD1-216ENST00000515527 NUBP1P53384 320 aa16.46■□□□□ 0.23
SMAD1-216ENST00000515527 COG2Q14746 738 aa16.46■□□□□ 0.23
SMAD1-216ENST00000515527 SMAD2Q15796 467 aaKnown RBP16.46■□□□□ 0.23
SMAD1-216ENST00000515527 SPTY2D1Q68D10 685 aaPredicted RBP16.46■□□□□ 0.23
SMAD1-216ENST00000515527 MCTP2Q6DN12 878 aa16.46■□□□□ 0.23
SMAD1-216ENST00000515527 KLHDC4Q8TBB5 520 aa16.46■□□□□ 0.23
SMAD1-216ENST00000515527 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMAD1-216ENST00000515527 CLDND1Q9NY35 253 aa16.46■□□□□ 0.23
SMAD1-216ENST00000515527 EP300Q09472 2414 aaPredicted RBP16.46■□□□□ 0.23
SMAD1-216ENST00000515527 FASNP49327 2511 aaKnown RBP16.45■□□□□ 0.22
SMAD1-216ENST00000515527 STXBP3O00186 592 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 MAP4K4O95819 1239 aaPredicted RBP16.45■□□□□ 0.22
SMAD1-216ENST00000515527 KCNJ6P48051 423 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 ERVK-21P61565 698 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 ITGA7Q13683 1181 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 CLUL1Q15846 466 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 ZNF792Q3KQV3 632 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 SLC43A3Q8NBI5 491 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 KIAA1683Q9H0B3 1180 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 CTNNA3Q9UI47 895 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 DIS3Q9Y2L1 958 aaKnown RBP16.45■□□□□ 0.22
SMAD1-216ENST00000515527 PTPRSQ13332 1948 aa16.45■□□□□ 0.22
SMAD1-216ENST00000515527 GJA9P57773 515 aa16.44■□□□□ 0.22
SMAD1-216ENST00000515527 MECOMQ03112 1051 aa16.44■□□□□ 0.22
SMAD1-216ENST00000515527 SIGLEC14Q08ET2 396 aa16.44■□□□□ 0.22
SMAD1-216ENST00000515527 RAB3GAP1Q15042 981 aa16.44■□□□□ 0.22
SMAD1-216ENST00000515527 TIGD5Q53EQ6 642 aa16.44■□□□□ 0.22
SMAD1-216ENST00000515527 CXCL17Q6UXB2 119 aa16.44■□□□□ 0.22
SMAD1-216ENST00000515527 FOXP4Q8IVH2 680 aaPredicted RBP16.44■□□□□ 0.22
SMAD1-216ENST00000515527 MRPL38Q96DV4 380 aaKnown RBP16.44■□□□□ 0.22
SMAD1-216ENST00000515527 TANGO6Q9C0B7 1094 aa16.44■□□□□ 0.22
SMAD1-216ENST00000515527 UPF3AQ9H1J1 476 aaKnown RBP16.44■□□□□ 0.22
SMAD1-216ENST00000515527 COL11A1P12107 1806 aaPredicted RBP16.43■□□□□ 0.22
SMAD1-216ENST00000515527 FAM208BQ5VWN6 2430 aa16.43■□□□□ 0.22
SMAD1-216ENST00000515527 DSG3P32926 999 aa16.43■□□□□ 0.22
SMAD1-216ENST00000515527 PHKA1P46020 1223 aa16.43■□□□□ 0.22
SMAD1-216ENST00000515527 PTPROQ16827 1216 aa16.43■□□□□ 0.22
SMAD1-216ENST00000515527 MB21D1Q8N884 522 aa16.43■□□□□ 0.22
SMAD1-216ENST00000515527 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
SMAD1-216ENST00000515527 KAZALD1Q96I82 304 aa16.43■□□□□ 0.22
SMAD1-216ENST00000515527 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
SMAD1-216ENST00000515527 LDHCP07864 332 aa16.42■□□□□ 0.22
SMAD1-216ENST00000515527 BEX3Q00994 111 aa16.42■□□□□ 0.22
SMAD1-216ENST00000515527 TWISTNBQ3B726 338 aaPredicted RBP16.42■□□□□ 0.22
SMAD1-216ENST00000515527 TCEAL5Q5H9L2 206 aa16.42■□□□□ 0.22
SMAD1-216ENST00000515527 ERICH6Q7L0X2 663 aa16.42■□□□□ 0.22
SMAD1-216ENST00000515527 TMCO2Q7Z6W1 182 aaPredicted RBP16.42■□□□□ 0.22
SMAD1-216ENST00000515527 BANK1Q8NDB2 785 aa16.42■□□□□ 0.22
SMAD1-216ENST00000515527 FBXO22Q8NEZ5 403 aa16.42■□□□□ 0.22
SMAD1-216ENST00000515527 BICC1Q9H694 974 aaKnown RBP16.42■□□□□ 0.22
SMAD1-216ENST00000515527 USP24Q9UPU5 2620 aa16.42■□□□□ 0.22
SMAD1-216ENST00000515527 CACNA1FO60840 1977 aa16.42■□□□□ 0.22
SMAD1-216ENST00000515527 SPTBN2O15020 2390 aa16.42■□□□□ 0.22
SMAD1-216ENST00000515527 LINC01553A4QN01 128 aa16.41■□□□□ 0.22
SMAD1-216ENST00000515527 ADCY6O43306 1168 aa16.41■□□□□ 0.22
SMAD1-216ENST00000515527 MBTPS2O43462 519 aa16.41■□□□□ 0.22
SMAD1-216ENST00000515527 CABYRO75952 493 aa16.41■□□□□ 0.22
SMAD1-216ENST00000515527 KIAA2013Q8IYS2 634 aa16.41■□□□□ 0.22
SMAD1-216ENST00000515527 SIL1Q9H173 461 aa16.41■□□□□ 0.22
SMAD1-216ENST00000515527 TET1Q8NFU7 2136 aa16.4■□□□□ 0.22
SMAD1-216ENST00000515527 SLC25A27O95847 323 aa16.4■□□□□ 0.22
SMAD1-216ENST00000515527 SNAI1O95863 264 aaPredicted RBP16.4■□□□□ 0.22
SMAD1-216ENST00000515527 CYP2C9P11712 490 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms