RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 FLOT1O75955 427 aa24.4■■□□□ 1.5
LSM6-207ENST00000515311 TTBK2Q6IQ55 1244 aa24.4■■□□□ 1.5
LSM6-207ENST00000515311 HSCBQ8IWL3 235 aa24.4■■□□□ 1.5
LSM6-207ENST00000515311 SPZ1Q9BXG8 430 aa24.4■■□□□ 1.5
LSM6-207ENST00000515311 PNMA3Q9UL41 463 aa24.4■■□□□ 1.5
LSM6-207ENST00000515311 A0A0G2JMZ2 1700 aa24.4■■□□□ 1.5
LSM6-207ENST00000515311 PDHXO00330 501 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 AOC2O75106 756 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 PLEKHA8P1O95397 391 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 ADD1P35611 737 aaKnown RBP24.39■■□□□ 1.49
LSM6-207ENST00000515311 IRX3P78415 501 aaPredicted RBP24.39■■□□□ 1.49
LSM6-207ENST00000515311 IKQ13123 557 aaPredicted RBP24.39■■□□□ 1.49
LSM6-207ENST00000515311 COG2Q14746 738 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 IFNL1Q8IU54 200 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 FAM43AQ8N2R8 423 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 NECAB1Q8N987 351 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 PRPF38AQ8NAV1 312 aaKnown RBP24.39■■□□□ 1.49
LSM6-207ENST00000515311 ZIC5Q96T25 663 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 ASCC2Q9H1I8 757 aaPredicted RBP24.39■■□□□ 1.49
LSM6-207ENST00000515311 FBXO28Q9NVF7 368 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 PPP1R9AQ9ULJ8 1098 aa24.39■■□□□ 1.49
LSM6-207ENST00000515311 OSBPP22059 807 aa24.38■■□□□ 1.49
LSM6-207ENST00000515311 FUT2Q10981 343 aa24.38■■□□□ 1.49
LSM6-207ENST00000515311 NTRK3Q16288 839 aa24.38■■□□□ 1.49
LSM6-207ENST00000515311 SYDE2Q5VT97 1194 aa24.38■■□□□ 1.49
LSM6-207ENST00000515311 OTUD7BQ6GQQ9 843 aa24.38■■□□□ 1.49
LSM6-207ENST00000515311 CPLX2Q6PUV4 134 aaKnown RBP24.38■■□□□ 1.49
LSM6-207ENST00000515311 SRBD1Q8N5C6 995 aaKnown RBP24.38■■□□□ 1.49
LSM6-207ENST00000515311 HOXC10Q9NYD6 342 aa24.38■■□□□ 1.49
LSM6-207ENST00000515311 IGF2BP3O00425 579 aaKnown RBP eCLIP24.37■■□□□ 1.49
LSM6-207ENST00000515311 CPLX1O14810 134 aa24.37■■□□□ 1.49
LSM6-207ENST00000515311 CDKL5O76039 1030 aa24.37■■□□□ 1.49
LSM6-207ENST00000515311 IFNAR1P17181 557 aa24.37■■□□□ 1.49
LSM6-207ENST00000515311 SLC16A2P36021 539 aa24.37■■□□□ 1.49
LSM6-207ENST00000515311 RIOX1Q9H6W3 641 aa24.37■■□□□ 1.49
LSM6-207ENST00000515311 PRR12Q9ULL5 1215 aa24.37■■□□□ 1.49
LSM6-207ENST00000515311 COL11A1P12107 1806 aaPredicted RBP24.36■■□□□ 1.49
LSM6-207ENST00000515311 MYH6P13533 1939 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 FDX1P10109 184 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 DSG3P32926 999 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 ST3GAL1Q11201 340 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 LBX2Q6XYB7 198 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 NBPF11Q86T75 865 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 ADGRF4Q8IZF3 695 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 KIFC2Q96AC6 838 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 UBA5Q9GZZ9 404 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 CPVLQ9H3G5 476 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 ADAMTS5Q9UNA0 930 aa24.36■■□□□ 1.49
LSM6-207ENST00000515311 CNTNAP5Q8WYK1 1306 aa24.35■■□□□ 1.49
LSM6-207ENST00000515311 CYTH3O43739 400 aa24.35■■□□□ 1.49
LSM6-207ENST00000515311 CUL4AQ13619 759 aa24.35■■□□□ 1.49
LSM6-207ENST00000515311 SLC35G1Q2M3R5 365 aa24.35■■□□□ 1.49
LSM6-207ENST00000515311 CCDC83Q8IWF9 413 aa24.35■■□□□ 1.49
LSM6-207ENST00000515311 CMTR1Q8N1G2 835 aaKnown RBP24.35■■□□□ 1.49
LSM6-207ENST00000515311 PARK7Q99497 189 aaKnown RBP24.35■■□□□ 1.49
LSM6-207ENST00000515311 LLPHQ9BRT6 129 aaKnown RBP24.35■■□□□ 1.49
LSM6-207ENST00000515311 JMJD4Q9H9V9 463 aa24.35■■□□□ 1.49
LSM6-207ENST00000515311 BAZ2BQ9UIF8 2168 aaKnown RBP24.35■■□□□ 1.49
LSM6-207ENST00000515311 SPDYE16A6NNV3 312 aaPredicted RBP24.34■■□□□ 1.49
LSM6-207ENST00000515311 ALDH1A1P00352 501 aa24.34■■□□□ 1.49
LSM6-207ENST00000515311 ANP32AP39687 249 aaKnown RBP24.34■■□□□ 1.49
LSM6-207ENST00000515311 HERVK_113P62684 666 aa24.34■■□□□ 1.49
LSM6-207ENST00000515311 BECN1Q14457 450 aa24.34■■□□□ 1.49
LSM6-207ENST00000515311 MB21D1Q8N884 522 aa24.34■■□□□ 1.49
LSM6-207ENST00000515311 GTF3C2Q8WUA4 911 aaPredicted RBP24.34■■□□□ 1.49
LSM6-207ENST00000515311 MTMR8Q96EF0 704 aa24.34■■□□□ 1.49
LSM6-207ENST00000515311 P2RX7Q99572 595 aaKnown RBP24.34■■□□□ 1.49
LSM6-207ENST00000515311 RANBP17Q9H2T7 1088 aaKnown RBP24.34■■□□□ 1.49
LSM6-207ENST00000515311 RBM27Q9P2N5 1060 aaKnown RBP24.34■■□□□ 1.49
LSM6-207ENST00000515311 VWA5AO00534 786 aa24.33■■□□□ 1.49
LSM6-207ENST00000515311 CTDNEP1O95476 244 aa24.33■■□□□ 1.49
LSM6-207ENST00000515311 ATG4CQ96DT6 458 aa24.33■■□□□ 1.49
LSM6-207ENST00000515311 RNF26Q9BY78 433 aaPredicted RBP24.33■■□□□ 1.49
LSM6-207ENST00000515311 SLC38A10Q9HBR0 1119 aa24.33■■□□□ 1.49
LSM6-207ENST00000515311 RBM19Q9Y4C8 960 aaKnown RBP24.33■■□□□ 1.49
LSM6-207ENST00000515311 TRIM22Q8IYM9 498 aa24.32■■□□□ 1.48
LSM6-207ENST00000515311 CCDC82Q8N4S0 544 aa24.32■■□□□ 1.48
LSM6-207ENST00000515311 NSUN7Q8NE18 718 aaKnown RBP24.32■■□□□ 1.48
LSM6-207ENST00000515311 SMCR8Q8TEV9 937 aaPredicted RBP24.32■■□□□ 1.48
LSM6-207ENST00000515311 RRP36Q96EU6 259 aaKnown RBP24.32■■□□□ 1.48
LSM6-207ENST00000515311 STK36Q9NRP7 1315 aa24.32■■□□□ 1.48
LSM6-207ENST00000515311 PRPF3O43395 683 aaKnown RBP24.31■■□□□ 1.48
LSM6-207ENST00000515311 ZBED4O75132 1171 aa24.31■■□□□ 1.48
LSM6-207ENST00000515311 FMNL1O95466 1100 aaPredicted RBP24.31■■□□□ 1.48
LSM6-207ENST00000515311 CYP2C8P10632 490 aa24.31■■□□□ 1.48
LSM6-207ENST00000515311 GCLCP48506 637 aaPredicted RBP24.31■■□□□ 1.48
LSM6-207ENST00000515311 SAMD1Q6SPF0 538 aaPredicted RBP24.31■■□□□ 1.48
LSM6-207ENST00000515311 PHKBQ93100 1093 aa24.31■■□□□ 1.48
LSM6-207ENST00000515311 VAT1LQ9HCJ6 419 aa24.31■■□□□ 1.48
LSM6-207ENST00000515311 ZBTB5O15062 677 aa24.3■■□□□ 1.48
LSM6-207ENST00000515311 OAZ1P54368 228 aa24.3■■□□□ 1.48
LSM6-207ENST00000515311 SSRP1Q08945 709 aaKnown RBP24.3■■□□□ 1.48
LSM6-207ENST00000515311 TAF1CQ15572 869 aaPredicted RBP24.3■■□□□ 1.48
LSM6-207ENST00000515311 CDC37Q16543 378 aaPredicted RBP24.3■■□□□ 1.48
LSM6-207ENST00000515311 REPS2Q8NFH8 660 aa24.3■■□□□ 1.48
LSM6-207ENST00000515311 SMARCC2Q8TAQ2 1214 aa24.3■■□□□ 1.48
LSM6-207ENST00000515311 INTS4Q96HW7 963 aaKnown RBP24.3■■□□□ 1.48
LSM6-207ENST00000515311 PIGSQ96S52 555 aa24.3■■□□□ 1.48
LSM6-207ENST00000515311 SEC63Q9UGP8 760 aaKnown RBP24.3■■□□□ 1.48
LSM6-207ENST00000515311 PNMA2Q9UL42 364 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms