RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 CPXCR1Q8N123 301 aa20.5■□□□□ 0.87
DDR1-277ENST00000515219 NPLOC4Q8TAT6 608 aa20.5■□□□□ 0.87
DDR1-277ENST00000515219 U2AF1L4Q8WU68 220 aaKnown RBP20.5■□□□□ 0.87
DDR1-277ENST00000515219 SHISA4Q96DD7 197 aa20.5■□□□□ 0.87
DDR1-277ENST00000515219 TMEM47Q9BQJ4 181 aa20.5■□□□□ 0.87
DDR1-277ENST00000515219 PAK6Q9NQU5 681 aaPredicted RBP20.5■□□□□ 0.87
DDR1-277ENST00000515219 TNRC18O15417 2968 aaPredicted RBP20.49■□□□□ 0.87
DDR1-277ENST00000515219 B4E1Z4 1266 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 HOXC6P09630 235 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 FCER1AP12319 257 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 COPB2P35606 906 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 STAT2P52630 851 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 SNRNP48Q6IEG0 339 aaKnown RBP20.49■□□□□ 0.87
DDR1-277ENST00000515219 RCSD1Q6JBY9 416 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 KCTD1Q719H9 257 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 FAM160B2Q86V87 743 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 CHURC1Q8WUH1 139 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 ZKSCAN3Q9BRR0 538 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 TEX13BQ9BXU2 312 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 BRCA2P51587 3418 aa20.49■□□□□ 0.87
DDR1-277ENST00000515219 SGSM2O43147 1006 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 KDM4AO75164 1064 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 TFRCP02786 760 aaKnown RBP20.48■□□□□ 0.87
DDR1-277ENST00000515219 NT5C2P49902 561 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 PTH1RQ03431 593 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 CACNB2Q08289 660 aaPredicted RBP20.48■□□□□ 0.87
DDR1-277ENST00000515219 CCDC96Q2M329 555 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 MAP3K21Q5TCX8 1036 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 MFSD14CQ5VZR4 134 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 RASGRP2Q7LDG7 609 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 ABRAQ8N0Z2 381 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 TTC14Q96N46 770 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 MMP19Q99542 508 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 SLC38A10Q9HBR0 1119 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 FLRT1Q9NZU1 646 aa20.48■□□□□ 0.87
DDR1-277ENST00000515219 IQCA1Q86XH1 822 aa20.47■□□□□ 0.87
DDR1-277ENST00000515219 DCAF4Q8WV16 495 aa20.47■□□□□ 0.87
DDR1-277ENST00000515219 KRT23Q9C075 422 aa20.47■□□□□ 0.87
DDR1-277ENST00000515219 CNNM2Q9H8M5 875 aa20.47■□□□□ 0.87
DDR1-277ENST00000515219 RAVER2Q9HCJ3 691 aaKnown RBP20.47■□□□□ 0.87
DDR1-277ENST00000515219 SLC5A4Q9NY91 659 aa20.47■□□□□ 0.87
DDR1-277ENST00000515219 PLXNA1Q9UIW2 1896 aa20.46■□□□□ 0.87
DDR1-277ENST00000515219 ATP2A1O14983 1001 aa20.46■□□□□ 0.87
DDR1-277ENST00000515219 COBLO75128 1261 aa20.46■□□□□ 0.87
DDR1-277ENST00000515219 FDX1P10109 184 aa20.46■□□□□ 0.87
DDR1-277ENST00000515219 KCTD2Q14681 263 aa20.46■□□□□ 0.87
DDR1-277ENST00000515219 RIPK3Q9Y572 518 aa20.46■□□□□ 0.87
DDR1-277ENST00000515219 U3KPZ7 1027 aaPredicted RBP20.46■□□□□ 0.87
DDR1-277ENST00000515219 PLA2G6O60733 806 aa20.45■□□□□ 0.86
DDR1-277ENST00000515219 OAZ1P54368 228 aa20.45■□□□□ 0.86
DDR1-277ENST00000515219 CCDC178Q5BJE1 867 aa20.45■□□□□ 0.86
DDR1-277ENST00000515219 ZSWIM5Q9P217 1185 aa20.45■□□□□ 0.86
DDR1-277ENST00000515219 CCND3P30281 292 aaPredicted RBP20.44■□□□□ 0.86
DDR1-277ENST00000515219 CYP2C19P33261 490 aa20.44■□□□□ 0.86
DDR1-277ENST00000515219 BMP2KLQ5H9B9 411 aa20.44■□□□□ 0.86
DDR1-277ENST00000515219 KIAA1211Q6ZU35 1233 aa20.44■□□□□ 0.86
DDR1-277ENST00000515219 DGKHQ86XP1 1220 aa20.44■□□□□ 0.86
DDR1-277ENST00000515219 CRISPLD2Q9H0B8 497 aa20.44■□□□□ 0.86
DDR1-277ENST00000515219 GPCPD1Q9NPB8 672 aa20.44■□□□□ 0.86
DDR1-277ENST00000515219 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
DDR1-277ENST00000515219 FRMPD2Q68DX3 1309 aaPredicted RBP20.44■□□□□ 0.86
DDR1-277ENST00000515219 FARP2O94887 1054 aaPredicted RBP20.43■□□□□ 0.86
DDR1-277ENST00000515219 PGK2P07205 417 aa20.43■□□□□ 0.86
DDR1-277ENST00000515219 CYP21A2P08686 494 aa20.43■□□□□ 0.86
DDR1-277ENST00000515219 CAPN2P17655 700 aa20.43■□□□□ 0.86
DDR1-277ENST00000515219 TRDNQ13061 729 aa20.43■□□□□ 0.86
DDR1-277ENST00000515219 OLFML2BQ68BL8 750 aa20.43■□□□□ 0.86
DDR1-277ENST00000515219 TTBK2Q6IQ55 1244 aa20.43■□□□□ 0.86
DDR1-277ENST00000515219 ZSCAN10Q96SZ4 725 aaPredicted RBP20.43■□□□□ 0.86
DDR1-277ENST00000515219 UBAC1Q9BSL1 405 aa20.43■□□□□ 0.86
DDR1-277ENST00000515219 PDHBP11177 359 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 CNGA1P29973 690 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 SLC16A2P36021 539 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 SNAP25P60880 206 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 CCDC174Q6PII3 467 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 MAP4K1Q92918 833 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 DDX11Q96FC9 970 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 MAML3Q96JK9 1138 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 KAT14Q9H8E8 782 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 HOMER2Q9NSB8 354 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 TNKSO95271 1327 aa20.42■□□□□ 0.86
DDR1-277ENST00000515219 MKI67P46013 3256 aaKnown RBP20.41■□□□□ 0.86
DDR1-277ENST00000515219 ENAHQ8N8S7 591 aaPredicted RBP20.41■□□□□ 0.86
DDR1-277ENST00000515219 PNMA1Q8ND90 353 aa20.41■□□□□ 0.86
DDR1-277ENST00000515219 CHST13Q8NET6 341 aa20.41■□□□□ 0.86
DDR1-277ENST00000515219 AGBL1Q96MI9 1066 aa20.41■□□□□ 0.86
DDR1-277ENST00000515219 ESYT1Q9BSJ8 1104 aa20.41■□□□□ 0.86
DDR1-277ENST00000515219 FBXO40Q9UH90 709 aa20.41■□□□□ 0.86
DDR1-277ENST00000515219 RBM8AQ9Y5S9 174 aaKnown RBP20.41■□□□□ 0.86
DDR1-277ENST00000515219 ZNF536O15090 1300 aa20.4■□□□□ 0.86
DDR1-277ENST00000515219 CENPBP07199 599 aaPredicted RBP20.4■□□□□ 0.86
DDR1-277ENST00000515219 ZNF543Q08ER8 600 aa20.4■□□□□ 0.86
DDR1-277ENST00000515219 ZNF792Q3KQV3 632 aa20.4■□□□□ 0.86
DDR1-277ENST00000515219 FRMPD3Q5JV73 1810 aa20.4■□□□□ 0.86
DDR1-277ENST00000515219 SYDE2Q5VT97 1194 aa20.4■□□□□ 0.86
DDR1-277ENST00000515219 BTNL9Q6UXG8 535 aa20.4■□□□□ 0.86
DDR1-277ENST00000515219 UBE2Q1Q7Z7E8 422 aa20.4■□□□□ 0.86
DDR1-277ENST00000515219 ANKRD35Q8N283 1001 aa20.4■□□□□ 0.86
DDR1-277ENST00000515219 ANKS1AQ92625 1134 aa20.4■□□□□ 0.86
DDR1-277ENST00000515219 DIS3Q9Y2L1 958 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms