RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 TMTC3Q6ZXV5 915 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 USP48Q86UV5 1035 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 GPC2Q8N158 579 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 KLRG1Q96E93 195 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 SLC26A6Q9BXS9 759 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 FOXP1Q9H334 677 aaPredicted RBP11.42□□□□□ -0.58
TPM3-221ENST00000513769 RRAGCQ9HB90 399 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 RNF181Q9P0P0 153 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 STX8Q9UNK0 236 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 DDX49Q9Y6V7 483 aaKnown RBP11.42□□□□□ -0.58
TPM3-221ENST00000513769 V9GY48 417 aaPredicted RBP11.42□□□□□ -0.58
TPM3-221ENST00000513769 CDK5RAP2Q96SN8 1893 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 NMT2O60551 498 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 LETM1O95202 739 aaPredicted RBP11.41□□□□□ -0.58
TPM3-221ENST00000513769 PARP1P09874 1014 aaKnown RBP11.41□□□□□ -0.58
TPM3-221ENST00000513769 UBE2HP62256 183 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 TCP10Q12799 353 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 RESTQ13127 1097 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 GPATCH4Q5T3I0 446 aaKnown RBP11.41□□□□□ -0.58
TPM3-221ENST00000513769 SWT1Q5T5J6 900 aaKnown RBP11.41□□□□□ -0.58
TPM3-221ENST00000513769 RBM26Q5T8P6 1007 aaKnown RBP11.41□□□□□ -0.58
TPM3-221ENST00000513769 CDC37L1Q7L3B6 337 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 SH3BP5LQ7L8J4 393 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 TEX2Q8IWB9 1127 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 ZFPM1Q8IX07 1006 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 CEP95Q96GE4 821 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.58
TPM3-221ENST00000513769 ISY1Q9ULR0 285 aaKnown RBP11.41□□□□□ -0.58
TPM3-221ENST00000513769 ARFGEF1Q9Y6D6 1849 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 LAMB1P07942 1786 aa11.41□□□□□ -0.58
TPM3-221ENST00000513769 hCG_1984214I3L0E3 225 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 SNHG28P0DPA3 235 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 CALML3P27482 149 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 DNM1Q05193 864 aaKnown RBP11.4□□□□□ -0.58
TPM3-221ENST00000513769 ASPRV1Q53RT3 343 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 KRT40Q6A162 431 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 SRBD1Q8N5C6 995 aaKnown RBP11.4□□□□□ -0.58
TPM3-221ENST00000513769 ZNF713Q8N859 430 aaPredicted RBP11.4□□□□□ -0.58
TPM3-221ENST00000513769 SLC44A5Q8NCS7 719 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 PHKBQ93100 1093 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 SYAP1Q96A49 352 aaPredicted RBP11.4□□□□□ -0.58
TPM3-221ENST00000513769 CSRNP1Q96S65 589 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 MYL10Q9BUA6 226 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 SPZ1Q9BXG8 430 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.4□□□□□ -0.58
TPM3-221ENST00000513769 RTEL1Q9NZ71 1219 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 CLIP2Q9UDT6 1046 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 PGAP2Q9UHJ9 254 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 MAD2L2Q9UI95 211 aa11.4□□□□□ -0.58
TPM3-221ENST00000513769 MORC2Q9Y6X9 1032 aaPredicted RBP11.4□□□□□ -0.58
TPM3-221ENST00000513769 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
TPM3-221ENST00000513769 KLRF2D3W0D1 207 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 MMP1P03956 469 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 AKR1B1P15121 316 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 RXRAP19793 462 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 TRAF1Q13077 416 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 PKN1Q16512 942 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
TPM3-221ENST00000513769 ABCB5Q2M3G0 1257 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 TJAP1Q5JTD0 557 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 COL13A1Q5TAT6 717 aaPredicted RBP11.39□□□□□ -0.59
TPM3-221ENST00000513769 FOXD4L5Q5VV16 416 aaPredicted RBP11.39□□□□□ -0.59
TPM3-221ENST00000513769 CCDC144CPQ8IYA2 1237 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 CCDC12Q8WUD4 166 aaPredicted RBP11.39□□□□□ -0.59
TPM3-221ENST00000513769 FOXD4L4Q8WXT5 416 aaPredicted RBP11.39□□□□□ -0.59
TPM3-221ENST00000513769 RIOX1Q9H6W3 641 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 BRMS1Q9HCU9 246 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.39□□□□□ -0.59
TPM3-221ENST00000513769 POLR3EQ9NVU0 708 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 ECM29Q5VYK3 1845 aa11.39□□□□□ -0.59
TPM3-221ENST00000513769 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 GOLGA6L4A6NEF3 574 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 TCP10L2B9ZVM9 353 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 YEATS4O95619 227 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 SCG2P13521 617 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 KIF23Q02241 960 aaPredicted RBP11.38□□□□□ -0.59
TPM3-221ENST00000513769 RILPL1Q5EBL4 403 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 JMYQ8N9B5 988 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 SMC1BQ8NDV3 1235 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 GMCL1P1Q8NEA9 526 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 SPATA32Q96LK8 384 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 PHF20Q9BVI0 1012 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 PPP2R3BQ9Y5P8 575 aa11.38□□□□□ -0.59
TPM3-221ENST00000513769 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
TPM3-221ENST00000513769 PDHBP11177 359 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 GMPSP49915 693 aaPredicted RBP11.37□□□□□ -0.59
TPM3-221ENST00000513769 CACNB3P54284 484 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 GNL2Q13823 731 aaKnown RBP11.37□□□□□ -0.59
TPM3-221ENST00000513769 SLC4A8Q2Y0W8 1093 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 ADALQ6DHV7 355 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 FERMT3Q86UX7 667 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 RAB11FIP4Q86YS3 637 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 APOBEC3FQ8IUX4 373 aaKnown RBP11.37□□□□□ -0.59
TPM3-221ENST00000513769 TNS4Q8IZW8 715 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 CCDC82Q8N4S0 544 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 CCDC148Q8NFR7 591 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 KCNG4Q8TDN1 519 aa11.37□□□□□ -0.59
TPM3-221ENST00000513769 DCAF4Q8WV16 495 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms