RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TRIM34Q9BYJ4 488 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 SPON1Q9HCB6 807 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 C6orf50Q9HD87 102 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 FAM13BQ9NYF5 915 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 SEC63Q9UGP8 760 aaKnown RBP9.58□□□□□ -0.88
RNF4-220ENST00000513578 PGAP2Q9UHJ9 254 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 PCDHA6Q9UN73 950 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 PCDHA8Q9Y5H6 950 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 CNTNAP1P78357 1384 aa9.58□□□□□ -0.88
RNF4-220ENST00000513578 PNMA6FA0A0J9YX94 578 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 LAD1O00515 517 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 GOLGA8HP0CJ92 632 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 CACNB3P54284 484 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 STX1AQ16623 288 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 ABCB5Q2M3G0 1257 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 RBM26Q5T8P6 1007 aaKnown RBP9.57□□□□□ -0.88
RNF4-220ENST00000513578 TYW1BQ6NUM6 668 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 KANK3Q6NY19 840 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 KRT25Q7Z3Z0 450 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 SIAH1Q8IUQ4 282 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 ZSCAN29Q8IWY8 852 aaPredicted RBP9.57□□□□□ -0.88
RNF4-220ENST00000513578 GMCL1Q96IK5 515 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 PYM1Q9BRP8 204 aaKnown RBP9.57□□□□□ -0.88
RNF4-220ENST00000513578 GINM1Q9NU53 330 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 ANO10Q9NW15 660 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 KIAA1468Q9P260 1216 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 USP25Q9UHP3 1055 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 TUBE1Q9UJT0 475 aa9.57□□□□□ -0.88
RNF4-220ENST00000513578 FAM205CA6NFA0 338 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 FZD9O00144 591 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 MPHOSPH10O00566 681 aaKnown RBP9.56□□□□□ -0.88
RNF4-220ENST00000513578 MYO1BO43795 1136 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 EEF2P13639 858 aaKnown RBP9.56□□□□□ -0.88
RNF4-220ENST00000513578 TPRNQ4KMQ1 711 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 BTNL9Q6UXG8 535 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 KRBA2Q6ZNG9 492 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 PIK3AP1Q6ZUJ8 805 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 HEATR3Q7Z4Q2 680 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 CKAP2LQ8IYA6 745 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 LRRC47Q8N1G4 583 aaKnown RBP9.56□□□□□ -0.88
RNF4-220ENST00000513578 C4orf32Q8N8J7 132 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 GPKOWQ92917 476 aaPredicted RBP eCLIP9.56□□□□□ -0.88
RNF4-220ENST00000513578 CLIC6Q96NY7 704 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 PIGSQ96S52 555 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 CSRNP1Q96S65 589 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 BPIFA3Q9BQP9 254 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 SDF4Q9BRK5 362 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 GLT8D2Q9H1C3 349 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 JMJD4Q9H9V9 463 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 KCNH3Q9ULD8 1083 aa9.56□□□□□ -0.88
RNF4-220ENST00000513578 MYH7BA7E2Y1 1941 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 CCDC194A0A1B0GVG4 234 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 SMCO2A6NFE2 343 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 ZBTB5O15062 677 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 PRPHP41219 470 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 TNNI2P48788 182 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 NAPAP54920 295 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 ICA1Q05084 483 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 SEPT2Q15019 361 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 ANO6Q4KMQ2 910 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 SLFN13Q68D06 897 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 MCTP2Q6DN12 878 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 ADGRF4Q8IZF3 695 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 RNF214Q8ND24 703 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.55□□□□□ -0.88
RNF4-220ENST00000513578 MYOZ2Q9NPC6 264 aa9.55□□□□□ -0.88
RNF4-220ENST00000513578 HOOK1Q9UJC3 728 aaKnown RBP9.55□□□□□ -0.88
RNF4-220ENST00000513578 ZBTB12Q9Y330 459 aaPredicted RBP9.55□□□□□ -0.88
RNF4-220ENST00000513578 TCP10L2B9ZVM9 353 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 F5H6K3 240 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 WNT10BO00744 389 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 ADAMTS3O15072 1205 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 PLA2G6O60733 806 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 LONP1P36776 959 aaKnown RBP9.54□□□□□ -0.88
RNF4-220ENST00000513578 ZNF165P49910 485 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 EIF6P56537 245 aaKnown RBP9.54□□□□□ -0.88
RNF4-220ENST00000513578 NLRP12P59046 1061 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 MDM2Q00987 491 aaPredicted RBP9.54□□□□□ -0.88
RNF4-220ENST00000513578 KLRC3Q07444 240 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 TRAF1Q13077 416 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 PTGDRQ13258 359 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 TNFAIP1Q13829 316 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 RRP1BQ14684 758 aaKnown RBP9.54□□□□□ -0.88
RNF4-220ENST00000513578 IQCB1Q15051 598 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 NONOQ15233 471 aaKnown RBP eCLIP9.54□□□□□ -0.886e-7■■■□□ 19.2
RNF4-220ENST00000513578 NOM1Q5C9Z4 860 aaKnown RBP9.54□□□□□ -0.88
RNF4-220ENST00000513578 NT5DC1Q5TFE4 455 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 RASGRP2Q7LDG7 609 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 CCDC34Q96HJ3 373 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 UBA5Q9GZZ9 404 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 NAT10Q9H0A0 1025 aaKnown RBP9.54□□□□□ -0.88
RNF4-220ENST00000513578 CSRNP2Q9H175 543 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 CBX8Q9HC52 389 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 RIC8AQ9NPQ8 531 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 BCS1LQ9Y276 419 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 TMX2Q9Y320 296 aa9.54□□□□□ -0.88
RNF4-220ENST00000513578 FRMPD2Q68DX3 1309 aaPredicted RBP9.54□□□□□ -0.88
RNF4-220ENST00000513578 CLRN2A0PK11 232 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
RNF4-220ENST00000513578 WNT7AO00755 349 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms