RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 USP14P54578 494 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 COL19A1Q14993 1142 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 ZYXQ15942 572 aaKnown RBP11.7□□□□□ -0.54
CLCN3-208ENST00000512813 ST3GAL2Q16842 350 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 BEND3Q5T5X7 828 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 LPIN2Q92539 896 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 RUNDC1Q96C34 613 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 PABPC5Q96DU9 382 aaKnown RBP11.7□□□□□ -0.54
CLCN3-208ENST00000512813 SCLYQ96I15 445 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 AGBL1Q96MI9 1066 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 FEZ1Q99689 392 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 UPF3AQ9H1J1 476 aaKnown RBP11.7□□□□□ -0.54
CLCN3-208ENST00000512813 DENND2AQ9ULE3 1009 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 SPTBN2O15020 2390 aa11.7□□□□□ -0.54
CLCN3-208ENST00000512813 PTPRSQ13332 1948 aa11.69□□□□□ -0.54
CLCN3-208ENST00000512813 ZNFX1Q9P2E3 1918 aaKnown RBP11.69□□□□□ -0.54
CLCN3-208ENST00000512813 LCHNA4D1U4 455 aa11.69□□□□□ -0.54
CLCN3-208ENST00000512813 ZBTB22O15209 634 aa11.69□□□□□ -0.54
CLCN3-208ENST00000512813 FCER1AP12319 257 aa11.69□□□□□ -0.54
CLCN3-208ENST00000512813 SMAD2Q15796 467 aaKnown RBP11.69□□□□□ -0.54
CLCN3-208ENST00000512813 METTL16Q86W50 562 aaKnown RBP11.69□□□□□ -0.54
CLCN3-208ENST00000512813 NKD2Q969F2 451 aaPredicted RBP11.69□□□□□ -0.54
CLCN3-208ENST00000512813 KIAA1683Q9H0B3 1180 aa11.69□□□□□ -0.54
CLCN3-208ENST00000512813 DHX36Q9H2U1 1008 aaKnown RBP11.69□□□□□ -0.54
CLCN3-208ENST00000512813 GNL3LQ9NVN8 582 aaKnown RBP11.69□□□□□ -0.54
CLCN3-208ENST00000512813 FAM184BQ9ULE4 1060 aa11.69□□□□□ -0.54
CLCN3-208ENST00000512813 DIS3Q9Y2L1 958 aaKnown RBP11.69□□□□□ -0.54
CLCN3-208ENST00000512813 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
CLCN3-208ENST00000512813 ERVK-21P61565 698 aa11.68□□□□□ -0.54
CLCN3-208ENST00000512813 IRX5P78411 483 aaPredicted RBP11.68□□□□□ -0.54
CLCN3-208ENST00000512813 ZXDAP98168 799 aa11.68□□□□□ -0.54
CLCN3-208ENST00000512813 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
CLCN3-208ENST00000512813 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
CLCN3-208ENST00000512813 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
CLCN3-208ENST00000512813 ZNF792Q3KQV3 632 aa11.68□□□□□ -0.54
CLCN3-208ENST00000512813 MCTP2Q6DN12 878 aa11.68□□□□□ -0.54
CLCN3-208ENST00000512813 CDCA7LQ96GN5 454 aa11.68□□□□□ -0.54
CLCN3-208ENST00000512813 KAZALD1Q96I82 304 aa11.68□□□□□ -0.54
CLCN3-208ENST00000512813 RPAP3Q9H6T3 665 aaPredicted RBP11.68□□□□□ -0.54
CLCN3-208ENST00000512813 SPC25Q9HBM1 224 aa11.68□□□□□ -0.54
CLCN3-208ENST00000512813 SCN5AQ14524 2016 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 KDM4AO75164 1064 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 GJA9P57773 515 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 SIGLEC14Q08ET2 396 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 PUM1Q14671 1186 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLCN3-208ENST00000512813 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 TIGD5Q53EQ6 642 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 NCAPG2Q86XI2 1143 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 MB21D1Q8N884 522 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 TGS1Q96RS0 853 aaKnown RBP11.67□□□□□ -0.54
CLCN3-208ENST00000512813 SEZ6LQ9BYH1 1024 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 MTUS1Q9ULD2 1270 aa11.67□□□□□ -0.54
CLCN3-208ENST00000512813 TNKSO95271 1327 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 PDS5AQ29RF7 1337 aaKnown RBP11.66□□□□□ -0.54
CLCN3-208ENST00000512813 B4GALT4O60513 344 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 PGK2P07205 417 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 RABL6Q3YEC7 729 aaPredicted RBP11.66□□□□□ -0.54
CLCN3-208ENST00000512813 GNASQ5JWF2 1037 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 FRMD5Q7Z6J6 570 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 DEFB128Q7Z7B8 93 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 MSL3Q8N5Y2 521 aaKnown RBP11.66□□□□□ -0.54
CLCN3-208ENST00000512813 ZNF384Q8TF68 577 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 MRPL38Q96DV4 380 aaKnown RBP11.66□□□□□ -0.54
CLCN3-208ENST00000512813 SUCLG2Q96I99 432 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 TRPV6Q9H1D0 765 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 HOXC10Q9NYD6 342 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 C9orf78Q9NZ63 289 aaPredicted RBP11.66□□□□□ -0.54
CLCN3-208ENST00000512813 CACNA1FO60840 1977 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 TANC1Q9C0D5 1861 aa11.66□□□□□ -0.54
CLCN3-208ENST00000512813 CTAGE5O15320 804 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 ADCY6O43306 1168 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 CABYRO75952 493 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 BAIAP3O94812 1187 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 GH2P01242 217 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 RFC2P35250 354 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 NKX3-2P78367 333 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 MECOMQ03112 1051 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 COG2Q14746 738 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 SPTY2D1Q68D10 685 aaPredicted RBP11.65□□□□□ -0.54
CLCN3-208ENST00000512813 FOXP4Q8IVH2 680 aaPredicted RBP11.65□□□□□ -0.54
CLCN3-208ENST00000512813 CRACR2BQ8N4Y2 399 aaPredicted RBP11.65□□□□□ -0.54
CLCN3-208ENST00000512813 ASIC4Q96FT7 647 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 MMP19Q99542 508 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 ABCF2Q9UG63 623 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 CTNNA3Q9UI47 895 aa11.65□□□□□ -0.54
CLCN3-208ENST00000512813 ZFYVE26Q68DK2 2539 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 MAST4O15021 2626 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 FLNBO75369 2602 aaKnown RBP11.64□□□□□ -0.55
CLCN3-208ENST00000512813 CDK5RAP2Q96SN8 1893 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 F6X3S4 739 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 PHKA1P46020 1223 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 ITGA7Q13683 1181 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 PLS1Q14651 629 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 TEX11Q8IYF3 940 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 TRIM34Q9BYJ4 488 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 ZHX1Q9UKY1 873 aaPredicted RBP11.64□□□□□ -0.55
CLCN3-208ENST00000512813 FRYLO94915 3013 aa11.64□□□□□ -0.55
CLCN3-208ENST00000512813 GRIN2DO15399 1336 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms