RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 TBC1D9Q6ZT07 1266 aa8.79□□□□□ -1
USP46-208ENST00000512656 FTSJ3Q8IY81 847 aaKnown RBP8.79□□□□□ -1
USP46-208ENST00000512656 TEX11Q8IYF3 940 aa8.79□□□□□ -1
USP46-208ENST00000512656 DHX36Q9H2U1 1008 aaKnown RBP8.79□□□□□ -1
USP46-208ENST00000512656 AGTPBP1Q9UPW5 1226 aa8.79□□□□□ -1
USP46-208ENST00000512656 BRCA2P51587 3418 aa8.79□□□□□ -1
USP46-208ENST00000512656 ERVH48-1M5A8F1 160 aa8.78□□□□□ -1
USP46-208ENST00000512656 ADH1AP07327 375 aa8.78□□□□□ -1
USP46-208ENST00000512656 GJB1P08034 283 aa8.78□□□□□ -1
USP46-208ENST00000512656 CCL5P13501 91 aa8.78□□□□□ -1
USP46-208ENST00000512656 CTGFP29279 349 aa8.78□□□□□ -1
USP46-208ENST00000512656 CAP2P40123 477 aa8.78□□□□□ -1
USP46-208ENST00000512656 MCAMP43121 646 aa8.78□□□□□ -1
USP46-208ENST00000512656 PTSQ03393 145 aa8.78□□□□□ -1
USP46-208ENST00000512656 PRKCZQ05513 592 aa8.78□□□□□ -1
USP46-208ENST00000512656 TNNI3KQ59H18 835 aa8.78□□□□□ -1
USP46-208ENST00000512656 HABP4Q5JVS0 413 aaKnown RBP8.78□□□□□ -1
USP46-208ENST00000512656 PI16Q6UXB8 463 aa8.78□□□□□ -1
USP46-208ENST00000512656 CERS3Q8IU89 383 aa8.78□□□□□ -1
USP46-208ENST00000512656 TMEM57Q8N5G2 664 aa8.78□□□□□ -1
USP46-208ENST00000512656 ZNF280CQ8ND82 737 aa8.78□□□□□ -1
USP46-208ENST00000512656 SSH3Q8TE77 659 aa8.78□□□□□ -1
USP46-208ENST00000512656 ZNF384Q8TF68 577 aa8.78□□□□□ -1
USP46-208ENST00000512656 NANOS1Q8WY41 292 aaKnown RBP8.78□□□□□ -1
USP46-208ENST00000512656 COA7Q96BR5 231 aa8.78□□□□□ -1
USP46-208ENST00000512656 RNF208Q9H0X6 261 aa8.78□□□□□ -1
USP46-208ENST00000512656 AS3MTQ9HBK9 375 aa8.78□□□□□ -1
USP46-208ENST00000512656 PI4KBQ9UBF8 816 aa8.78□□□□□ -1
USP46-208ENST00000512656 FPGT-TNNI3KV9GXZ4 949 aa8.78□□□□□ -1
USP46-208ENST00000512656 TRIOBPQ9H2D6 2365 aa8.78□□□□□ -1
USP46-208ENST00000512656 DOCK2Q92608 1830 aa8.77□□□□□ -1
USP46-208ENST00000512656 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 TNPO2O14787 897 aaKnown RBP8.77□□□□□ -1.01
USP46-208ENST00000512656 ADCY3O60266 1144 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 LILRA1O75019 489 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 SURF6O75683 361 aaKnown RBP8.77□□□□□ -1.01
USP46-208ENST00000512656 GJA8P48165 433 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 GCLCP48506 637 aaPredicted RBP8.77□□□□□ -1.01
USP46-208ENST00000512656 ATP8B2P98198 1209 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 HNRNPUQ00839 825 aaKnown RBP eCLIP8.77□□□□□ -1.01
USP46-208ENST00000512656 SPP2Q13103 211 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 MTFR1Q15390 333 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 FAM110CQ1W6H9 321 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 ZNF512BQ96KM6 892 aaPredicted RBP8.77□□□□□ -1.01
USP46-208ENST00000512656 HTATIP2Q9BUP3 242 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 GINM1Q9NU53 330 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 TNNQ9UQP3 1299 aa8.77□□□□□ -1.01
USP46-208ENST00000512656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.77□□□□□ -1.01
USP46-208ENST00000512656 FAM196BA6NMK8 535 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 APBB1O00213 710 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 HLA-DOAP06340 250 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 ASNSP08243 561 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 FLT3LGP49771 235 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 HMGCS2P54868 508 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 IRF5Q13568 498 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 TMED8Q6PL24 325 aaPredicted RBP8.76□□□□□ -1.01
USP46-208ENST00000512656 FOXP4Q8IVH2 680 aaPredicted RBP8.76□□□□□ -1.01
USP46-208ENST00000512656 ITPRIPQ8IWB1 547 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 CRACR2BQ8N4Y2 399 aaPredicted RBP8.76□□□□□ -1.01
USP46-208ENST00000512656 SH3RF3Q8TEJ3 882 aaPredicted RBP8.76□□□□□ -1.01
USP46-208ENST00000512656 AGBL1Q96MI9 1066 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 DBNDD2Q9BQY9 259 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 SNRKQ9NRH2 765 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 TMPRSS4Q9NRS4 437 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 AATFQ9NY61 560 aaKnown RBP eCLIP8.76□□□□□ -1.01
USP46-208ENST00000512656 TMOD4Q9NZQ9 345 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 NOP58Q9Y2X3 529 aaKnown RBP8.76□□□□□ -1.01
USP46-208ENST00000512656 NR2E3Q9Y5X4 410 aa8.76□□□□□ -1.01
USP46-208ENST00000512656 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 CYP2E1P05181 493 aaPredicted RBP8.75□□□□□ -1.01
USP46-208ENST00000512656 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 RELBQ01201 579 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 TREML2Q5T2D2 321 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 CCDC84Q86UT8 332 aaPredicted RBP8.75□□□□□ -1.01
USP46-208ENST00000512656 ERC1Q8IUD2 1116 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 ANKRD13CQ8N6S4 541 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 U2AF1L4Q8WU68 220 aaKnown RBP8.75□□□□□ -1.01
USP46-208ENST00000512656 TGFBRAP1Q8WUH2 860 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 DPF3Q92784 378 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 SHISA4Q96DD7 197 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 WDR18Q9BV38 432 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.75□□□□□ -1.01
USP46-208ENST00000512656 GABRQQ9UN88 632 aa8.75□□□□□ -1.01
USP46-208ENST00000512656 DOCK1Q14185 1865 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 RANBP2P49792 3224 aaKnown RBP8.74□□□□□ -1.01
USP46-208ENST00000512656 FIGNL2A6NMB9 653 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 C19orf81C9J6K1 198 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 H0YGN5 161 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 ZBTB7BO15156 539 aaPredicted RBP8.74□□□□□ -1.01
USP46-208ENST00000512656 FARP2O94887 1054 aaPredicted RBP8.74□□□□□ -1.01
USP46-208ENST00000512656 SGPL1O95470 568 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 TFRCP02786 760 aaKnown RBP8.74□□□□□ -1.01
USP46-208ENST00000512656 INHAP05111 366 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 FBXO45P0C2W1 286 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 ELNP15502 786 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 CYP7A1P22680 504 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 PTGIRP43119 386 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 CTSOP43234 321 aaPredicted RBP8.74□□□□□ -1.01
USP46-208ENST00000512656 ZAP70P43403 619 aa8.74□□□□□ -1.01
USP46-208ENST00000512656 BACE1P56817 501 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms