RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SYF2O95926 243 aaKnown RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 ZNF157P51786 506 aaPredicted RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 VCPP55072 806 aaKnown RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 GSDMDP57764 484 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 THOC5Q13769 683 aaKnown RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 MXD4Q14582 209 aaPredicted RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 RAPH1Q70E73 1250 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 TRIM48Q8IWZ4 208 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 PI4KAP1Q8N8J0 262 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 SPATA5Q8NB90 893 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 TGFBRAP1Q8WUH2 860 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 BTN2A2Q8WVV5 523 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 MAIP1Q8WWC4 291 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 RPGRIP1Q96KN7 1286 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 MYO1AQ9UBC5 1043 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 TRIM35Q9UPQ4 493 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 CREB3O43889 395 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 ALDH1A2O94788 518 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 THEMIS2Q5TEJ8 643 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 ARHGAP24Q8N264 748 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 EPAS1Q99814 870 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 TRMT1Q9NXH9 659 aaKnown RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 PIM2Q9P1W9 311 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 ASIC3Q9UHC3 531 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 PLCH2O75038 1416 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 ANKRD50Q9ULJ7 1429 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 HCLS1P14317 486 aaPredicted RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 ZNF131P52739 623 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 DMP1Q13316 513 aaPredicted RBP9.78□□□□□ -0.84
VCAN-208ENST00000512590 ZBTB41Q5SVQ8 909 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 AFG1LQ8WV93 481 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 TRPC7Q9HCX4 862 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 PCDHB9Q9Y5E1 797 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 PCDHA1Q9Y5I3 950 aa9.78□□□□□ -0.84
VCAN-208ENST00000512590 TNPO2O14787 897 aaKnown RBP9.77□□□□□ -0.84
VCAN-208ENST00000512590 PLCD1P51178 756 aa9.77□□□□□ -0.84
VCAN-208ENST00000512590 CIAPIN1Q6FI81 312 aa9.77□□□□□ -0.84
VCAN-208ENST00000512590 FAM117BQ6P1L5 589 aa9.77□□□□□ -0.84
VCAN-208ENST00000512590 ASIC4Q96FT7 647 aa9.77□□□□□ -0.84
VCAN-208ENST00000512590 CENPKQ9BS16 269 aa9.77□□□□□ -0.84
VCAN-208ENST00000512590 SRRTQ9BXP5 876 aaKnown RBP9.77□□□□□ -0.84
VCAN-208ENST00000512590 FAM49AQ9H0Q0 323 aaPredicted RBP9.77□□□□□ -0.84
VCAN-208ENST00000512590 ZSWIM4Q9H7M6 989 aa9.77□□□□□ -0.84
VCAN-208ENST00000512590 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
VCAN-208ENST00000512590 PMLP29590 882 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 PRIM1P49642 420 aaKnown RBP9.77□□□□□ -0.85
VCAN-208ENST00000512590 CCDC15Q0P6D6 951 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 BRD3Q15059 726 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 MMEL1Q495T6 779 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 TTC19Q6DKK2 380 aaPredicted RBP9.77□□□□□ -0.85
VCAN-208ENST00000512590 EEPD1Q7L9B9 569 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 KDRP35968 1356 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 N4BP1O75113 896 aaKnown RBP9.77□□□□□ -0.85
VCAN-208ENST00000512590 UPP2O95045 317 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 TTC4O95801 387 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 RAP1GDS1P52306 607 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 FRA10AC1Q70Z53 315 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 SCN4BQ8IWT1 228 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 PDCD6IPQ8WUM4 868 aaKnown RBP9.77□□□□□ -0.85
VCAN-208ENST00000512590 TEKT3Q9BXF9 490 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 EXO5Q9H790 373 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 VPS37BQ9H9H4 285 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 GDPD2Q9HCC8 539 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 CACNA2D2Q9NY47 1150 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 PAXBP1Q9Y5B6 917 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 DAPK1P53355 1430 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
VCAN-208ENST00000512590 KRT86O43790 486 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 MYL1P05976 194 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 CERKLQ49MI3 558 aaPredicted RBP9.77□□□□□ -0.85
VCAN-208ENST00000512590 SKA1Q96BD8 255 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 TCF3P15923 654 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 PSMA3P25788 255 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 CCND2P30279 289 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 PIK3CAP42336 1068 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 LRMPQ12912 555 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 SLMAPQ14BN4 828 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 GPATCH4Q5T3I0 446 aaKnown RBP9.77□□□□□ -0.85
VCAN-208ENST00000512590 CEP85Q6P2H3 762 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 CYP26C1Q6V0L0 522 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 ARMCX2Q7L311 632 aa9.77□□□□□ -0.85
VCAN-208ENST00000512590 EVI5O60447 810 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 MNAT1P51948 309 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 ARHGAP4P98171 946 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 PDE1CQ14123 709 aaPredicted RBP9.76□□□□□ -0.85
VCAN-208ENST00000512590 MBD4O95243 580 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 HSP90AA4PQ58FG1 418 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 KIAA1755Q5JYT7 1200 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 KAZNQ674X7 775 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 CNNM4Q6P4Q7 775 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 LRGUKQ96M69 825 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 ZFYVE28Q9HCC9 887 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 PAG1Q9NWQ8 432 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 ANXA1P04083 346 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 CPB1P15086 417 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 MFSD14BQ5SR56 506 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 ANKS6Q68DC2 871 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 PIK3AP1Q6ZUJ8 805 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 TSGA10Q9BZW7 698 aa9.76□□□□□ -0.85
VCAN-208ENST00000512590 C1orf112Q9NSG2 853 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms