RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 RABGGTAQ92696 567 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 TRIM47Q96LD4 638 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 MED4Q9NPJ6 270 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 HOXD10P28358 340 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 UBASH3AP57075 661 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 ZNF445P59923 1031 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 CAV1Q03135 178 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 SEL1L2Q5TEA6 688 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.46□□□□□ -1.53
PTPN13-209ENST00000511467 DNM3Q9UQ16 869 aa5.46□□□□□ -1.53
PTPN13-209ENST00000511467 MINDY4BA8MYZ0 360 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 HIBADHP31937 336 aaKnown RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 KCNJ6P48051 423 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 MYL5Q02045 173 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 SNW1Q13573 536 aaKnown RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 CEP85Q6P2H3 762 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 GBP7Q8N8V2 638 aaPredicted RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 RBM46Q8TBY0 533 aaKnown RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 SCLT1Q96NL6 688 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 ODF2LQ9ULJ1 636 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 PPP2R3BQ9Y5P8 575 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 CACNA1SQ13698 1873 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 IRS4O14654 1257 aaPredicted RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 CYP7A1P22680 504 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 RPS6KB1P23443 525 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 PLCB4Q15147 1175 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 PREPLQ4J6C6 727 aaPredicted RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 C4orf22Q6V702 233 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 CCDC42Q96M95 316 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 PLA2G12BQ9BX93 195 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 SEZ6LQ9BYH1 1024 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 AZI2Q9H6S1 392 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 LARSQ9P2J5 1176 aaKnown RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 PKD1L3Q7Z443 1732 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 SRGAP2BP0DMP2 458 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 CALCOCO2Q13137 446 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 NOL8Q76FK4 1167 aaKnown RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 SND1Q7KZF4 910 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 ADPGKQ9BRR6 497 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 UTP11Q9Y3A2 253 aaKnown RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 HEG1Q9ULI3 1381 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 PATL2C9JE40 543 aaKnown RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 MED7O43513 233 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 ALX1Q15699 326 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 CCDC129Q6ZRS4 1044 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 COPS6Q7L5N1 327 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 POTEDQ86YR6 584 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 ZBTB8OSQ8IWT0 167 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 NDUFAF2Q8N183 169 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 DHTKD1Q96HY7 919 aaPredicted RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 SMC6Q96SB8 1091 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 STIM2Q9P246 746 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 NUP205Q92621 2012 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 OPLAHO14841 1288 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 LDHAP00338 332 aaKnown RBP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 LRRC63Q05C16 580 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 MTX1Q13505 466 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPN13-209ENST00000511467 COL4A3BPQ9Y5P4 624 aa5.46□□□□□ -1.54
PTPN13-209ENST00000511467 DYTNA2CJ06 578 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 N4BP3O15049 544 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 APOA4P06727 396 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 CCDC6Q16204 474 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 TKFCQ3LXA3 575 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 PLA2G4DQ86XP0 818 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 NME9Q86XW9 330 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 CCDC170Q8IYT3 715 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 RAB3IL1Q8TBN0 382 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 GSDMAQ96QA5 445 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 TRIM7Q9C029 511 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 SRPRBQ9Y5M8 271 aaKnown RBP5.45□□□□□ -1.54
PTPN13-209ENST00000511467 HOXB6P17509 224 aaKnown RBP5.45□□□□□ -1.54
PTPN13-209ENST00000511467 RPS12P25398 132 aaKnown RBP5.45□□□□□ -1.54
PTPN13-209ENST00000511467 RIPPLY1Q0D2K3 151 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 NUDT18Q6ZVK8 323 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 HDXQ7Z353 690 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 KANSL2Q9H9L4 492 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 SEPT11Q9NVA2 429 aaKnown RBP5.45□□□□□ -1.54
PTPN13-209ENST00000511467 ATP6V0A2Q9Y487 856 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 ADAMTSL3P82987 1691 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 AKR1B10O60218 316 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 PPP6R2O75170 966 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 HSPA4P34932 840 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 RASSF7Q02833 373 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 DMP1Q13316 513 aaPredicted RBP5.45□□□□□ -1.54
PTPN13-209ENST00000511467 FOXP4Q8IVH2 680 aaPredicted RBP5.45□□□□□ -1.54
PTPN13-209ENST00000511467 XAGE3Q8WTP9 111 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 HVCN1Q96D96 273 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 BPIFA3Q9BQP9 254 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 CHPF2Q9P2E5 772 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 ANAPC4Q9UJX5 808 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 PHACTR2O75167 634 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 F13A1P00488 732 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 JAK3P52333 1124 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 CCDC15Q0P6D6 951 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 PHLDB2Q86SQ0 1253 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 MB21D1Q8N884 522 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 BANK1Q8NDB2 785 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 ARAP2Q8WZ64 1704 aa5.45□□□□□ -1.54
PTPN13-209ENST00000511467 OPTNQ96CV9 577 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms