RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 TSPY2A6NKD2 308 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 RARBP10826 455 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 RTP1P59025 263 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 PPARAQ07869 468 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 CCDC129Q6ZRS4 1044 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 TDHQ8IZJ6 230 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 PRPF38AQ8NAV1 312 aaKnown RBP12.05□□□□□ -0.48
SCARB2-204ENST00000509994 FERMT2Q96AC1 680 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 CEP95Q96GE4 821 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 GDF15Q99988 308 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCARB2-204ENST00000509994 HOMER2Q9NSB8 354 aa12.05□□□□□ -0.48
SCARB2-204ENST00000509994 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 SOX1O00570 391 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-204ENST00000509994 BMP8BP34820 402 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 TFAP4Q01664 338 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 CTDSPL2Q05D32 466 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 ZMYM1Q5SVZ6 1142 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 SLFN13Q68D06 897 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 ANKRD35Q8N283 1001 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 TINF2Q9BSI4 451 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 RAVER2Q9HCJ3 691 aaKnown RBP12.04□□□□□ -0.48
SCARB2-204ENST00000509994 XPNPEP3Q9NQH7 507 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 MTMR4Q9NYA4 1195 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 ZHX1Q9UKY1 873 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-204ENST00000509994 ZNF214Q9UL59 606 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-204ENST00000509994 STX8Q9UNK0 236 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 SZT2Q5T011 3432 aa12.04□□□□□ -0.48
SCARB2-204ENST00000509994 RANBP6O60518 1105 aaKnown RBP12.03□□□□□ -0.48
SCARB2-204ENST00000509994 ADCYAP1R1P41586 468 aa12.03□□□□□ -0.48
SCARB2-204ENST00000509994 RRP12Q5JTH9 1297 aaKnown RBP12.03□□□□□ -0.48
SCARB2-204ENST00000509994 PPP4R3BQ5MIZ7 849 aa12.03□□□□□ -0.48
SCARB2-204ENST00000509994 RNF180Q86T96 592 aa12.03□□□□□ -0.48
SCARB2-204ENST00000509994 EVI5LQ96CN4 794 aa12.03□□□□□ -0.48
SCARB2-204ENST00000509994 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
SCARB2-204ENST00000509994 ADAMTS5Q9UNA0 930 aa12.03□□□□□ -0.48
SCARB2-204ENST00000509994 TMEM232C9JQI7 657 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 PGK1P00558 417 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 BMP3P12645 472 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 AKR1A1P14550 325 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 SLC1A4P43007 532 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 STAT2P52630 851 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 LRRC41Q15345 812 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 CCDC96Q2M329 555 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 TRIM60Q495X7 471 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 GMCL1P1Q8NEA9 526 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 NEDD1Q8NHV4 660 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 RILPL2Q969X0 211 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 LENG1Q96BZ8 264 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-204ENST00000509994 LTBP2Q14767 1821 aa12.02□□□□□ -0.49
SCARB2-204ENST00000509994 IGKV6D-41A0A0C4DH26 115 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 TAL1P17542 331 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-204ENST00000509994 MCCP23508 829 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 ZNF792Q3KQV3 632 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 B4GALNT3Q6L9W6 998 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 CCDC174Q6PII3 467 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 SLC39A5Q6ZMH5 540 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 DEFB123Q8N688 67 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 REPS2Q8NFH8 660 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 CHURC1Q8WUH1 139 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 LNPKQ9C0E8 428 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 FBXO40Q9UH90 709 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 NRBP1Q9UHY1 535 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 DIS3Q9Y2L1 958 aaKnown RBP12.01□□□□□ -0.49
SCARB2-204ENST00000509994 RIPK3Q9Y572 518 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 PLIN4Q96Q06 1357 aa12.01□□□□□ -0.49
SCARB2-204ENST00000509994 PDE1AP54750 535 aa12□□□□□ -0.49
SCARB2-204ENST00000509994 KCTD1Q719H9 257 aa12□□□□□ -0.49
SCARB2-204ENST00000509994 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
SCARB2-204ENST00000509994 FAM160B2Q86V87 743 aa12□□□□□ -0.49
SCARB2-204ENST00000509994 MKL1Q969V6 931 aa12□□□□□ -0.49
SCARB2-204ENST00000509994 VTI1AQ96AJ9 217 aa12□□□□□ -0.49
SCARB2-204ENST00000509994 SLC38A10Q9HBR0 1119 aa12□□□□□ -0.49
SCARB2-204ENST00000509994 FAM184BQ9ULE4 1060 aa12□□□□□ -0.49
SCARB2-204ENST00000509994 SYNPO2Q9UMS6 1093 aa12□□□□□ -0.49
SCARB2-204ENST00000509994 LAMA3Q16787 3333 aa12□□□□□ -0.49
SCARB2-204ENST00000509994 LAMA2P24043 3122 aaKnown RBP11.99□□□□□ -0.49
SCARB2-204ENST00000509994 NMT2O60551 498 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 PQBP1O60828 265 aaKnown RBP11.99□□□□□ -0.49
SCARB2-204ENST00000509994 ALAS1P13196 640 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 SNAP25P60880 206 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 HDAC1Q13547 482 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-204ENST00000509994 VPS53Q5VIR6 699 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 Q7L0L9 218 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 CHST13Q8NET6 341 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 FAM227BQ96M60 508 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 RWDD1Q9H446 243 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-204ENST00000509994 ACAD9Q9H845 621 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 SPC25Q9HBM1 224 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 INCENPQ9NQS7 918 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 HELLSQ9NRZ9 838 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 RNF146Q9NTX7 359 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 SYNGAP1Q96PV0 1343 aa11.99□□□□□ -0.49
SCARB2-204ENST00000509994 SYNRGQ9UMZ2 1314 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 A0A0D9SFI3 127 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 A0A1W2PQ45 241 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-204ENST00000509994 A0A1W2PQY0 241 aa11.98□□□□□ -0.49
SCARB2-204ENST00000509994 POTEB2H3BUK9 544 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms