RNA–Protein interactions for RNA: ENST00000509593.1

ABCE1-208, Transcript of ATP binding cassette subfamily E member 1, human

TSL 5

Gene ABCE1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCE1-208	ENST00000509593	MEIS1	O00470	390 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	SIGLEC6	O43699	453 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	PEX10	O60683	326 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	NME1	P15531	152 aa	Known RBP	5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	SDHB	P21912	280 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	ZNF165	P49910	485 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	BBS9	Q3SYG4	887 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	ADGRF1	Q5T601	910 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	CEP128	Q6ZU80	1094 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	METTL16	Q86W50	562 aa	Known RBP	5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	TMEM87A	Q8NBN3	555 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	MAP6	Q96JE9	813 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	HHIPL1	Q96JK4	782 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	SLC9A7	Q96T83	725 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	GCM1	Q9NP62	436 aa		5.23	□□□□□ -1.57
ABCE1-208	ENST00000509593	TEX51	A0A1B0GUA7	166 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	FAM86C2P	A6NEL3	165 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	NRDC	O43847	1150 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	CCNF	P41002	786 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	KIR2DL1	P43626	348 aa	Predicted RBP	5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	KIR2DL2	P43627	348 aa	Predicted RBP	5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	SLITRK4	Q8IW52	837 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	SLC6A18	Q96N87	628 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	PLCD4	Q9BRC7	762 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	NT5C1A	Q9BXI3	368 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	MKRN2	Q9H000	416 aa	Known RBP	5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	CHST7	Q9NS84	486 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	GFOD1	Q9NXC2	390 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	FBXL21	Q9UKT6	434 aa		5.22	□□□□□ -1.57
ABCE1-208	ENST00000509593	OR14I1	A6ND48	311 aa		5.21	□□□□□ -1.58
ABCE1-208	ENST00000509593	SEMA7A	O75326	666 aa		5.21	□□□□□ -1.58
ABCE1-208	ENST00000509593	RTP1	P59025	263 aa		5.21	□□□□□ -1.58
ABCE1-208	ENST00000509593	FANCC	Q00597	558 aa		5.21	□□□□□ -1.58
ABCE1-208	ENST00000509593	KIR3DS1	Q14943	382 aa		5.21	□□□□□ -1.58
ABCE1-208	ENST00000509593	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.21	□□□□□ -1.58
ABCE1-208	ENST00000509593	KIAA0825	Q8IV33	1275 aa		5.21	□□□□□ -1.58
ABCE1-208	ENST00000509593	SPON2	Q9BUD6	331 aa		5.21	□□□□□ -1.58
ABCE1-208	ENST00000509593	KRTAP4-9	Q9BYQ8	210 aa		5.21	□□□□□ -1.58
ABCE1-208	ENST00000509593	MEIS3P2	A8K0S8	358 aa		5.2	□□□□□ -1.58
ABCE1-208	ENST00000509593	TNFRSF10C	O14798	259 aa		5.2	□□□□□ -1.58
ABCE1-208	ENST00000509593	TCF3	P15923	654 aa		5.2	□□□□□ -1.58
ABCE1-208	ENST00000509593	CTSK	P43235	329 aa		5.2	□□□□□ -1.58
ABCE1-208	ENST00000509593	AUH	Q13825	339 aa	Known RBP	5.2	□□□□□ -1.58
ABCE1-208	ENST00000509593	LILRA6	Q6PI73	481 aa		5.2	□□□□□ -1.58
ABCE1-208	ENST00000509593	TTLL10	Q6ZVT0	673 aa		5.2	□□□□□ -1.58
ABCE1-208	ENST00000509593	CRTAC1	Q9NQ79	661 aa		5.2	□□□□□ -1.58
ABCE1-208	ENST00000509593	CNOT6	Q9ULM6	557 aa	Known RBP	5.2	□□□□□ -1.58
ABCE1-208	ENST00000509593	FADS2P1	A8MWK0	482 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593		C9IYK1	514 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	INHBB	P09529	407 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	ACR	P10323	421 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	PNLIP	P16233	465 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	SRSF3	P84103	164 aa	Known RBP	5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	SSPN	Q14714	243 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	FCRL2	Q96LA5	508 aa	Predicted RBP	5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	CDADC1	Q9BWV3	514 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	BCL11A	Q9H165	835 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	TNFRSF10D	Q9UBN6	386 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	MBD1	Q9UIS9	605 aa	Predicted RBP	5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	GPR55	Q9Y2T6	319 aa	Predicted RBP	5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	KCTD3	Q9Y597	815 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	PCDHB12	Q9Y5F1	795 aa		5.19	□□□□□ -1.58
ABCE1-208	ENST00000509593	ZNF205	O95201	554 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	VAV1	P15498	845 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	VIPR1	P32241	457 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	ZNF76	P36508	570 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	RANGAP1	P46060	587 aa	Predicted RBP	5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	CEBPA	P49715	358 aa	Predicted RBP	5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	RACK1	P63244	317 aa	Known RBP	5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	HSF5	Q4G112	596 aa	Predicted RBP	5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	ZNF394	Q53GI3	561 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	INTS3	Q68E01	1043 aa	Known RBP	5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	CRTC3	Q6UUV7	619 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	PANK1	Q8TE04	598 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	AP5S1	Q9NUS5	200 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	ERVK13-1	Q9NX77	482 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	SIRT5	Q9NXA8	310 aa		5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	SUCO	Q9UBS9	1254 aa	Known RBP	5.18	□□□□□ -1.58
ABCE1-208	ENST00000509593	WTIP	A6NIX2	430 aa	Predicted RBP	5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	SCAMP3	O14828	347 aa	Known RBP	5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	SHOX	O15266	292 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	BMP7	P18075	431 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	BMP8B	P34820	402 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	EPHB3	P54753	998 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	YBX1	P67809	324 aa	Known RBP	5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	ZNF385B	Q569K4	471 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	TDRD10	Q5VZ19	366 aa	Known RBP	5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	GALNT18	Q6P9A2	607 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	USP48	Q86UV5	1035 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	CCDC144CP	Q8IYA2	1237 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	C7orf61	Q8IZ16	206 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	TMEM52	Q8NDY8	209 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	DHRS1	Q96LJ7	313 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	CNTD2	Q9H8S5	307 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	ZNRF3	Q9ULT6	936 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	PCDHGB7	Q9Y5F8	929 aa		5.17	□□□□□ -1.58
ABCE1-208	ENST00000509593	PRKCA	P17252	672 aa		5.16	□□□□□ -1.58
ABCE1-208	ENST00000509593	PI3	P19957	117 aa		5.16	□□□□□ -1.58
ABCE1-208	ENST00000509593	ERVFRD-1	P60508	538 aa		5.16	□□□□□ -1.58
ABCE1-208	ENST00000509593	FBXW10	Q5XX13	1052 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms