RNA–Protein interactions for RNA: ENST00000509593.1

ABCE1-208, Transcript of ATP binding cassette subfamily E member 1, humanhuman

TSL 5

Gene ABCE1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-208ENST00000509593 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
ABCE1-208ENST00000509593 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
ABCE1-208ENST00000509593 SENP3Q9H4L4 574 aaPredicted RBP17.4■□□□□ 0.38
ABCE1-208ENST00000509593 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
ABCE1-208ENST00000509593 FOXD1Q16676 465 aa16.24■□□□□ 0.19
ABCE1-208ENST00000509593 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
ABCE1-208ENST00000509593 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
ABCE1-208ENST00000509593 ADRA2BP18089 450 aa15.33■□□□□ 0.04
ABCE1-208ENST00000509593 PIAS4Q8N2W9 510 aaPredicted RBP15.21■□□□□ 0.03
ABCE1-208ENST00000509593 MSH5O43196 834 aa15.07■□□□□ 0
ABCE1-208ENST00000509593 POTEDQ86YR6 584 aa14.42□□□□□ -0.1
ABCE1-208ENST00000509593 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
ABCE1-208ENST00000509593 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
ABCE1-208ENST00000509593 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
ABCE1-208ENST00000509593 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
ABCE1-208ENST00000509593 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
ABCE1-208ENST00000509593 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
ABCE1-208ENST00000509593 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
ABCE1-208ENST00000509593 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
ABCE1-208ENST00000509593 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
ABCE1-208ENST00000509593 NPM3O75607 178 aaKnown RBP13.2□□□□□ -0.3
ABCE1-208ENST00000509593 KCNA4P22459 653 aa13.14□□□□□ -0.31
ABCE1-208ENST00000509593 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
ABCE1-208ENST00000509593 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
ABCE1-208ENST00000509593 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
ABCE1-208ENST00000509593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.8□□□□□ -0.36
ABCE1-208ENST00000509593 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.37
ABCE1-208ENST00000509593 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
ABCE1-208ENST00000509593 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
ABCE1-208ENST00000509593 SLC4A1APQ9BWU0 796 aaKnown RBP12.43□□□□□ -0.42
ABCE1-208ENST00000509593 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
ABCE1-208ENST00000509593 CAPN15O75808 1086 aa12.29□□□□□ -0.44
ABCE1-208ENST00000509593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.45
ABCE1-208ENST00000509593 HNRNPUL2Q1KMD3 747 aaKnown RBP12.21□□□□□ -0.45
ABCE1-208ENST00000509593 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
ABCE1-208ENST00000509593 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
ABCE1-208ENST00000509593 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
ABCE1-208ENST00000509593 DSG3P32926 999 aa12.16□□□□□ -0.46
ABCE1-208ENST00000509593 APLP2Q06481 763 aa12.16□□□□□ -0.46
ABCE1-208ENST00000509593 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
ABCE1-208ENST00000509593 ZBTB22O15209 634 aa12.1□□□□□ -0.47
ABCE1-208ENST00000509593 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
ABCE1-208ENST00000509593 ABCB7O75027 752 aa12.04□□□□□ -0.48
ABCE1-208ENST00000509593 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
ABCE1-208ENST00000509593 POLA2Q14181 598 aa11.87□□□□□ -0.51
ABCE1-208ENST00000509593 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
ABCE1-208ENST00000509593 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
ABCE1-208ENST00000509593 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
ABCE1-208ENST00000509593 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
ABCE1-208ENST00000509593 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
ABCE1-208ENST00000509593 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
ABCE1-208ENST00000509593 FBLN2P98095 1184 aa11.4□□□□□ -0.58
ABCE1-208ENST00000509593 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
ABCE1-208ENST00000509593 AKT1S1Q96B36 256 aa11.35□□□□□ -0.59
ABCE1-208ENST00000509593 POTEHQ6S545 545 aa11.33□□□□□ -0.6
ABCE1-208ENST00000509593 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.61
ABCE1-208ENST00000509593 CHRDL2Q6WN34 429 aa11.26□□□□□ -0.61
ABCE1-208ENST00000509593 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
ABCE1-208ENST00000509593 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
ABCE1-208ENST00000509593 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
ABCE1-208ENST00000509593 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
ABCE1-208ENST00000509593 PITPNM1O00562 1244 aa11.15□□□□□ -0.62
ABCE1-208ENST00000509593 SSUH2Q9Y2M2 353 aa11.13□□□□□ -0.63
ABCE1-208ENST00000509593 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
ABCE1-208ENST00000509593 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
ABCE1-208ENST00000509593 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
ABCE1-208ENST00000509593 SPDYE1Q8NFV5 336 aaPredicted RBP11.01□□□□□ -0.65
ABCE1-208ENST00000509593 FXR2P51116 673 aaKnown RBP eCLIP11□□□□□ -0.65
ABCE1-208ENST00000509593 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
ABCE1-208ENST00000509593 PRKAR2AP13861 404 aaKnown RBP10.87□□□□□ -0.67
ABCE1-208ENST00000509593 PRR29P0C7W0 189 aa10.86□□□□□ -0.67
ABCE1-208ENST00000509593 CHADLQ6NUI6 762 aa10.81□□□□□ -0.68
ABCE1-208ENST00000509593 HAX1O00165 279 aa10.8□□□□□ -0.68
ABCE1-208ENST00000509593 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
ABCE1-208ENST00000509593 EVX2Q03828 476 aa10.72□□□□□ -0.69
ABCE1-208ENST00000509593 SP7Q8TDD2 431 aaPredicted RBP10.71□□□□□ -0.69
ABCE1-208ENST00000509593 PROM2Q8N271 834 aa10.68□□□□□ -0.7
ABCE1-208ENST00000509593 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
ABCE1-208ENST00000509593 FARP1Q9Y4F1 1045 aaPredicted RBP10.65□□□□□ -0.7
ABCE1-208ENST00000509593 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
ABCE1-208ENST00000509593 FKBP8Q14318 412 aa10.61□□□□□ -0.71
ABCE1-208ENST00000509593 CD44P16070 742 aaKnown RBP10.53□□□□□ -0.72
ABCE1-208ENST00000509593 MNX1P50219 401 aaPredicted RBP10.48□□□□□ -0.73
ABCE1-208ENST00000509593 GABBR2O75899 941 aa10.46□□□□□ -0.73
ABCE1-208ENST00000509593 MIER1Q8N108 512 aa10.44□□□□□ -0.74
ABCE1-208ENST00000509593 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
ABCE1-208ENST00000509593 ZRANB1Q9UGI0 708 aa10.42□□□□□ -0.74
ABCE1-208ENST00000509593 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
ABCE1-208ENST00000509593 ZNF579Q8NAF0 562 aaKnown RBP10.35□□□□□ -0.75
ABCE1-208ENST00000509593 PLEKHG5O94827 1062 aa10.34□□□□□ -0.75
ABCE1-208ENST00000509593 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
ABCE1-208ENST00000509593 PHF12Q96QT6 1004 aa10.3□□□□□ -0.76
ABCE1-208ENST00000509593 TSPYL2Q9H2G4 693 aaPredicted RBP10.29□□□□□ -0.76
ABCE1-208ENST00000509593 CLCN6P51797 869 aa10.28□□□□□ -0.76
ABCE1-208ENST00000509593 FBXO3Q9UK99 471 aa10.28□□□□□ -0.76
ABCE1-208ENST00000509593 GALR2O43603 387 aaPredicted RBP10.25□□□□□ -0.77
ABCE1-208ENST00000509593 POTEIP0CG38 1075 aa10.25□□□□□ -0.77
ABCE1-208ENST00000509593 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
ABCE1-208ENST00000509593 ZBTB47Q9UFB7 747 aaPredicted RBP10.21□□□□□ -0.77
ABCE1-208ENST00000509593 DCBLD2Q96PD2 775 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms