RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
DDX41-210ENST00000509576 CHD7Q9P2D1 2997 aa16.07■□□□□ 0.16
DDX41-210ENST00000509576 MYO9BQ13459 2157 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 SYNRGQ9UMZ2 1314 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 F5H6K3 240 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 FOXP2O15409 715 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 PTGS1P23219 599 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 KLRC3Q07444 240 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 RASGRP2Q7LDG7 609 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 KBTBD3Q8NAB2 608 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 KLHDC9Q8NEP7 349 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
DDX41-210ENST00000509576 SEMA6BQ9H3T3 888 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 ARPP21Q9UBL0 812 aaPredicted RBP16.06■□□□□ 0.16
DDX41-210ENST00000509576 RCAN3Q9UKA8 241 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 DIS3Q9Y2L1 958 aaKnown RBP16.06■□□□□ 0.16
DDX41-210ENST00000509576 TACC3Q9Y6A5 838 aa16.06■□□□□ 0.16
DDX41-210ENST00000509576 DDX49Q9Y6V7 483 aaKnown RBP16.06■□□□□ 0.16
DDX41-210ENST00000509576 KIAA0355O15063 1070 aa16.05■□□□□ 0.16
DDX41-210ENST00000509576 CTAGE5O15320 804 aa16.05■□□□□ 0.16
DDX41-210ENST00000509576 PRDM1O75626 825 aa16.05■□□□□ 0.16
DDX41-210ENST00000509576 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
DDX41-210ENST00000509576 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.05■□□□□ 0.16
DDX41-210ENST00000509576 SLF1Q9BQI6 1058 aa16.05■□□□□ 0.16
DDX41-210ENST00000509576 KATNBL1Q9H079 304 aa16.05■□□□□ 0.16
DDX41-210ENST00000509576 GOPCQ9HD26 462 aa16.05■□□□□ 0.16
DDX41-210ENST00000509576 NYAP2Q9P242 653 aa16.05■□□□□ 0.16
DDX41-210ENST00000509576 NRBP1Q9UHY1 535 aa16.05■□□□□ 0.16
DDX41-210ENST00000509576 ASTN1O14525 1302 aa16.04■□□□□ 0.16
DDX41-210ENST00000509576 RAD21O60216 631 aa16.04■□□□□ 0.16
DDX41-210ENST00000509576 RARBP10826 455 aa16.04■□□□□ 0.16
DDX41-210ENST00000509576 MS4A1P11836 297 aa16.04■□□□□ 0.16
DDX41-210ENST00000509576 SNRNP48Q6IEG0 339 aaKnown RBP16.04■□□□□ 0.16
DDX41-210ENST00000509576 MAMDC4Q6UXC1 1216 aa16.04■□□□□ 0.16
DDX41-210ENST00000509576 MYLIPQ8WY64 445 aa16.04■□□□□ 0.16
DDX41-210ENST00000509576 CEP95Q96GE4 821 aa16.04■□□□□ 0.16
DDX41-210ENST00000509576 ECHDC1Q9NTX5 307 aa16.04■□□□□ 0.16
DDX41-210ENST00000509576 SLC5A4Q9NY91 659 aa16.04■□□□□ 0.16
DDX41-210ENST00000509576 MINDY4BA8MYZ0 360 aa16.03■□□□□ 0.16
DDX41-210ENST00000509576 GPAA1O43292 621 aa16.03■□□□□ 0.16
DDX41-210ENST00000509576 PQBP1O60828 265 aaKnown RBP16.03■□□□□ 0.16
DDX41-210ENST00000509576 CLTBP09497 229 aa16.03■□□□□ 0.16
DDX41-210ENST00000509576 KCTD2Q14681 263 aa16.03■□□□□ 0.16
DDX41-210ENST00000509576 ZNF697Q5TEC3 545 aa16.03■□□□□ 0.16
DDX41-210ENST00000509576 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX41-210ENST00000509576 LRRC47Q8N1G4 583 aaKnown RBP16.03■□□□□ 0.16
DDX41-210ENST00000509576 APPBP2Q92624 585 aa16.03■□□□□ 0.16
DDX41-210ENST00000509576 TEX13BQ9BXU2 312 aa16.03■□□□□ 0.16
DDX41-210ENST00000509576 DCTPP1Q9H773 170 aa16.03■□□□□ 0.16
DDX41-210ENST00000509576 RAVER2Q9HCJ3 691 aaKnown RBP16.03■□□□□ 0.16
DDX41-210ENST00000509576 PRKAG2Q9UGJ0 569 aa16.03■□□□□ 0.16
DDX41-210ENST00000509576 PLIN4Q96Q06 1357 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 ZNF536O15090 1300 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 TTC28Q96AY4 2481 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 ATP2A1O14983 1001 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 RNF113AO15541 343 aaKnown RBP16.02■□□□□ 0.16
DDX41-210ENST00000509576 AKR1A1P14550 325 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 ACLYP53396 1101 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 SMAD3P84022 425 aaKnown RBP16.02■□□□□ 0.16
DDX41-210ENST00000509576 C16orf59Q7L2K0 433 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 ANKRD33Q7Z3H0 272 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 CPXCR1Q8N123 301 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 PI4K2BQ8TCG2 481 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 MKL1Q969V6 931 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 SLC38A10Q9HBR0 1119 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 INCENPQ9NQS7 918 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 MTMR4Q9NYA4 1195 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 CLIP2Q9UDT6 1046 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 TBX21Q9UL17 535 aa16.02■□□□□ 0.16
DDX41-210ENST00000509576 SYNGAP1Q96PV0 1343 aa16.01■□□□□ 0.15
DDX41-210ENST00000509576 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
DDX41-210ENST00000509576 KCNA10Q16322 511 aa16.01■□□□□ 0.15
DDX41-210ENST00000509576 TMEM63BQ5T3F8 832 aa16.01■□□□□ 0.15
DDX41-210ENST00000509576 GIMAP6Q6P9H5 292 aa16.01■□□□□ 0.15
DDX41-210ENST00000509576 C11orf97A0A1B0GVM6 126 aaPredicted RBP16■□□□□ 0.15
DDX41-210ENST00000509576 CDK7P50613 346 aa16■□□□□ 0.15
DDX41-210ENST00000509576 ZSCAN25Q6NSZ9 544 aa16■□□□□ 0.15
DDX41-210ENST00000509576 RNF180Q86T96 592 aa16■□□□□ 0.15
DDX41-210ENST00000509576 AMOTL1Q8IY63 956 aa16■□□□□ 0.15
DDX41-210ENST00000509576 IFNL3Q8IZI9 196 aa16■□□□□ 0.15
DDX41-210ENST00000509576 PRPF38AQ8NAV1 312 aaKnown RBP16■□□□□ 0.15
DDX41-210ENST00000509576 USP38Q8NB14 1042 aa16■□□□□ 0.15
DDX41-210ENST00000509576 KIFC2Q96AC6 838 aa16■□□□□ 0.15
DDX41-210ENST00000509576 CHMP4CQ96CF2 233 aa16■□□□□ 0.15
DDX41-210ENST00000509576 UPF3AQ9H1J1 476 aaKnown RBP16■□□□□ 0.15
DDX41-210ENST00000509576 CDKN2AIPQ9NXV6 580 aaPredicted RBP16■□□□□ 0.15
DDX41-210ENST00000509576 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
DDX41-210ENST00000509576 PCDHB15Q9Y5E8 787 aa16■□□□□ 0.15
DDX41-210ENST00000509576 SCN5AQ14524 2016 aa16■□□□□ 0.15
DDX41-210ENST00000509576 SALL3Q9BXA9 1300 aa15.99■□□□□ 0.15
DDX41-210ENST00000509576 CST5P28325 142 aaPredicted RBP15.99■□□□□ 0.15
DDX41-210ENST00000509576 SLC4A3P48751 1232 aa15.99■□□□□ 0.15
DDX41-210ENST00000509576 ACVR2BQ13705 512 aa15.99■□□□□ 0.15
DDX41-210ENST00000509576 MAFAQ8NHW3 353 aaPredicted RBP15.99■□□□□ 0.15
DDX41-210ENST00000509576 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.99■□□□□ 0.155e-9■■□□□ 12.4
DDX41-210ENST00000509576 TSEN34Q9BSV6 310 aaKnown RBP15.99■□□□□ 0.15
DDX41-210ENST00000509576 MKNK2Q9HBH9 465 aa15.99■□□□□ 0.15
DDX41-210ENST00000509576 SOWAHBA6NEL2 793 aa15.98■□□□□ 0.15
DDX41-210ENST00000509576 DUSP11O75319 330 aaKnown RBP15.98■□□□□ 0.15
DDX41-210ENST00000509576 SNAP25P60880 206 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms