RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 PRAMEF19Q5SWL8 479 aa13□□□□□ -0.33
RNF4-212ENST00000509258 ANO1Q5XXA6 986 aa13□□□□□ -0.33
RNF4-212ENST00000509258 FAM109BQ6ICB4 259 aaPredicted RBP13□□□□□ -0.33
RNF4-212ENST00000509258 SLC39A5Q6ZMH5 540 aa13□□□□□ -0.33
RNF4-212ENST00000509258 ZNF589Q86UQ0 364 aaPredicted RBP13□□□□□ -0.33
RNF4-212ENST00000509258 CHMP4CQ96CF2 233 aa13□□□□□ -0.33
RNF4-212ENST00000509258 GOPCQ9HD26 462 aa13□□□□□ -0.33
RNF4-212ENST00000509258 NYAP2Q9P242 653 aa13□□□□□ -0.33
RNF4-212ENST00000509258 NRBP1Q9UHY1 535 aa13□□□□□ -0.33
RNF4-212ENST00000509258 PPP1R9AQ9ULJ8 1098 aa13□□□□□ -0.33
RNF4-212ENST00000509258 LTBP2Q14767 1821 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 F5H6K3 240 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 VWA5AO00534 786 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 NMT2O60551 498 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 COPB2P35606 906 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 KLRC3Q07444 240 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 NMIQ13287 307 aaPredicted RBP12.99□□□□□ -0.33
RNF4-212ENST00000509258 KCTD2Q14681 263 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 C1orf53Q5VUE5 145 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 EVI5LQ96CN4 794 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 MMP19Q99542 508 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 NAPBQ9H115 298 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 PRDM5Q9NQX1 630 aaPredicted RBP12.99□□□□□ -0.33
RNF4-212ENST00000509258 IL17RBQ9NRM6 502 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 MTMR4Q9NYA4 1195 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 CLIP2Q9UDT6 1046 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 RIPK3Q9Y572 518 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 LRRC37A2A6NM11 1700 aa12.99□□□□□ -0.33
RNF4-212ENST00000509258 LAMA2P24043 3122 aaKnown RBP12.98□□□□□ -0.33
RNF4-212ENST00000509258 POTEB2H3BUK9 544 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 PGK2P07205 417 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 RARBP10826 455 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 LRRC41Q15345 812 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 TRIM60Q495X7 471 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 RIOX2Q8IUF8 465 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 PLEKHM2Q8IWE5 1019 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 NEDD1Q8NHV4 660 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 MKL1Q969V6 931 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 ZNF287Q9HBT7 754 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 XPNPEP3Q9NQH7 507 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
RNF4-212ENST00000509258 UNC80Q8N2C7 3258 aa12.98□□□□□ -0.33
RNF4-212ENST00000509258 TAL1P17542 331 aaPredicted RBP12.97□□□□□ -0.33
RNF4-212ENST00000509258 ADCYAP1R1P41586 468 aa12.97□□□□□ -0.33
RNF4-212ENST00000509258 IRX6P78412 446 aaPredicted RBP12.97□□□□□ -0.33
RNF4-212ENST00000509258 TFAP4Q01664 338 aa12.97□□□□□ -0.33
RNF4-212ENST00000509258 ZNF697Q5TEC3 545 aa12.97□□□□□ -0.33
RNF4-212ENST00000509258 RNF180Q86T96 592 aa12.97□□□□□ -0.33
RNF4-212ENST00000509258 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
RNF4-212ENST00000509258 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
RNF4-212ENST00000509258 TINF2Q9BSI4 451 aa12.97□□□□□ -0.33
RNF4-212ENST00000509258 PDLIM7Q9NR12 457 aa12.97□□□□□ -0.33
RNF4-212ENST00000509258 DIS3Q9Y2L1 958 aaKnown RBP12.97□□□□□ -0.33
RNF4-212ENST00000509258 MYH6P13533 1939 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 PDE4AP27815 886 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 STAT3P40763 770 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 NUCB1Q02818 461 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 FERMT2Q96AC1 680 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 FGD4Q96M96 766 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 NACAP1Q9BZK3 213 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 PHF24Q9UPV7 400 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.33
RNF4-212ENST00000509258 CTDP1Q9Y5B0 961 aaPredicted RBP12.96□□□□□ -0.33
RNF4-212ENST00000509258 TTLL1O95922 423 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 FGAP02671 866 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 TSPY3P0CV98 308 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 TSPY8P0CW00 308 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
RNF4-212ENST00000509258 AKR1A1P14550 325 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 ZNF792Q3KQV3 632 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 SLFN13Q68D06 897 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 BADQ92934 168 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 LENG1Q96BZ8 264 aaPredicted RBP12.95□□□□□ -0.34
RNF4-212ENST00000509258 FAM161BQ96MY7 647 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 TEX13BQ9BXU2 312 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 IL25Q9H293 177 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 RAVER2Q9HCJ3 691 aaKnown RBP12.95□□□□□ -0.34
RNF4-212ENST00000509258 HELLSQ9NRZ9 838 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 ANAPC4Q9UJX5 808 aa12.95□□□□□ -0.34
RNF4-212ENST00000509258 CLTBP09497 229 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 FGRP09769 529 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 NOVP48745 357 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 SNAP25P60880 206 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 HAND2P61296 217 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 TLE2Q04725 743 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 PDE4BQ07343 736 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 SHHQ15465 462 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 ALX1Q15699 326 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 MCMDC2Q4G0Z9 681 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 C9orf50Q5SZB4 431 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
RNF4-212ENST00000509258 TBC1D10CQ8IV04 446 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
RNF4-212ENST00000509258 CPXCR1Q8N123 301 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
RNF4-212ENST00000509258 GMCL1P1Q8NEA9 526 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
RNF4-212ENST00000509258 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms