RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 CDX2Q99626 313 aaPredicted RBP12.88□□□□□ -0.35
TUSC3-208ENST00000509177 MROH8Q9H579 483 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 SLC5A4Q9NY91 659 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 RLFQ13129 1914 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 F5H6K3 240 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 TTLL1O95922 423 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 TFAP4Q01664 338 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 NUCB1Q02818 461 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 KLRC3Q07444 240 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 MCMDC2Q4G0Z9 681 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 FAM47AQ5JRC9 791 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 C9orf50Q5SZB4 431 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 NUP88Q99567 741 aaPredicted RBP12.87□□□□□ -0.35
TUSC3-208ENST00000509177 SEMA6BQ9H3T3 888 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 TOMM22Q9NS69 142 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 FBXO28Q9NVF7 368 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 PRKAG2Q9UGJ0 569 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 MYH8P13535 1937 aa12.87□□□□□ -0.35
TUSC3-208ENST00000509177 RANBP6O60518 1105 aaKnown RBP12.86□□□□□ -0.35
TUSC3-208ENST00000509177 SLC25A27O95847 323 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 FCER1AP12319 257 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 ADORA2AP29274 412 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 SLC4A3P48751 1232 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 CTDSPL2Q05D32 466 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 TMEM132BQ14DG7 1078 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 PPP4R3BQ5MIZ7 849 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 SLC39A5Q6ZMH5 540 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 TICAM2Q86XR7 235 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 NEDD1Q8NHV4 660 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 CEP95Q96GE4 821 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 FAM227BQ96M60 508 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 SLF1Q9BQI6 1058 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 MTMR4Q9NYA4 1195 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 PPP1R9AQ9ULJ8 1098 aa12.86□□□□□ -0.35
TUSC3-208ENST00000509177 A0A0D9SFI3 127 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 TSPY2A6NKD2 308 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 VWA5AO00534 786 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 ZBED4O75132 1171 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 NDUFB10O96000 172 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 STAT3P40763 770 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
TUSC3-208ENST00000509177 IRX6P78412 446 aaPredicted RBP12.85□□□□□ -0.35
TUSC3-208ENST00000509177 NMIQ13287 307 aaPredicted RBP12.85□□□□□ -0.35
TUSC3-208ENST00000509177 VPS53Q5VIR6 699 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 ANO1Q5XXA6 986 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 RIOX2Q8IUF8 465 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 PLEKHM2Q8IWE5 1019 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
TUSC3-208ENST00000509177 ARRDC4Q8NCT1 418 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 MAFAQ8NHW3 353 aaPredicted RBP12.85□□□□□ -0.35
TUSC3-208ENST00000509177 BADQ92934 168 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 MMP19Q99542 508 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 PRDM5Q9NQX1 630 aaPredicted RBP12.85□□□□□ -0.35
TUSC3-208ENST00000509177 ZNF236Q9UL36 1845 aa12.85□□□□□ -0.35
TUSC3-208ENST00000509177 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 TRIM43BA6NCK2 446 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 COBLO75128 1261 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 COPB2P35606 906 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 IKQ13123 557 aaPredicted RBP12.84□□□□□ -0.35
TUSC3-208ENST00000509177 KCTD2Q14681 263 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 SNX17Q15036 470 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 ALX1Q15699 326 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 TRIM60Q495X7 471 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 SH3RF1Q7Z6J0 888 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 ABRAQ8N0Z2 381 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
TUSC3-208ENST00000509177 MKL1Q969V6 931 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 KIFC2Q96AC6 838 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 TRIM43Q96BQ3 446 aaPredicted RBP12.84□□□□□ -0.35
TUSC3-208ENST00000509177 CHMP4CQ96CF2 233 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 TTYH1Q9H313 450 aaPredicted RBP12.84□□□□□ -0.35
TUSC3-208ENST00000509177 INCENPQ9NQS7 918 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 DIAPH3Q9NSV4 1193 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
TUSC3-208ENST00000509177 KBTBD13C9JR72 458 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 SEPT4O43236 478 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 FGAP02671 866 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 SDSP20132 328 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 ADCYAP1R1P41586 468 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 RRP12Q5JTH9 1297 aaKnown RBP12.83□□□□□ -0.36
TUSC3-208ENST00000509177 PRAMEF19Q5SWL8 479 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 CPXCR1Q8N123 301 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 MYLIPQ8WY64 445 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 PDLIM7Q9NR12 457 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 FEM1BQ9UK73 627 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 SYNPO2Q9UMS6 1093 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 ADAMTS5Q9UNA0 930 aa12.83□□□□□ -0.36
TUSC3-208ENST00000509177 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
TUSC3-208ENST00000509177 TMEM232C9JQI7 657 aa12.82□□□□□ -0.36
TUSC3-208ENST00000509177 HIP1O00291 1037 aa12.82□□□□□ -0.36
TUSC3-208ENST00000509177 FOXP2O15409 715 aa12.82□□□□□ -0.36
TUSC3-208ENST00000509177 HSPD1P10809 573 aaKnown RBP12.82□□□□□ -0.36
TUSC3-208ENST00000509177 BMP3P12645 472 aa12.82□□□□□ -0.36
TUSC3-208ENST00000509177 ITGB8P26012 769 aa12.82□□□□□ -0.36
TUSC3-208ENST00000509177 SMAD3P84022 425 aaKnown RBP12.82□□□□□ -0.36
TUSC3-208ENST00000509177 LRRC41Q15345 812 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms