RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 CLIP2Q9UDT6 1046 aa12.6□□□□□ -0.39
SIL1-210ENST00000508639 DIS3Q9Y2L1 958 aaKnown RBP12.6□□□□□ -0.39
SIL1-210ENST00000508639 MINDY4BA8MYZ0 360 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 DLL1O00548 723 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 CTAGE5O15320 804 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 PTGS1P23219 599 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 TLE2Q04725 743 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 FAM109BQ6ICB4 259 aaPredicted RBP12.59□□□□□ -0.39
SIL1-210ENST00000508639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
SIL1-210ENST00000508639 RASGRP2Q7LDG7 609 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 IFNL3Q8IZI9 196 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 KLHDC9Q8NEP7 349 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 CEP95Q96GE4 821 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 KATNBL1Q9H079 304 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 MTMR4Q9NYA4 1195 aa12.59□□□□□ -0.39
SIL1-210ENST00000508639 ARPP21Q9UBL0 812 aaPredicted RBP12.59□□□□□ -0.39
SIL1-210ENST00000508639 DDX49Q9Y6V7 483 aaKnown RBP12.59□□□□□ -0.39
SIL1-210ENST00000508639 LCTP09848 1927 aa12.58□□□□□ -0.39
SIL1-210ENST00000508639 SPTBN5Q9NRC6 3674 aaKnown RBP12.58□□□□□ -0.4
SIL1-210ENST00000508639 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
SIL1-210ENST00000508639 ATP2A1O14983 1001 aa12.58□□□□□ -0.4
SIL1-210ENST00000508639 ZSCAN25Q6NSZ9 544 aa12.58□□□□□ -0.4
SIL1-210ENST00000508639 MAMDC4Q6UXC1 1216 aa12.58□□□□□ -0.4
SIL1-210ENST00000508639 SLF1Q9BQI6 1058 aa12.58□□□□□ -0.4
SIL1-210ENST00000508639 TTYH1Q9H313 450 aaPredicted RBP12.58□□□□□ -0.4
SIL1-210ENST00000508639 SH2D4AQ9H788 454 aa12.58□□□□□ -0.4
SIL1-210ENST00000508639 RAVER2Q9HCJ3 691 aaKnown RBP12.58□□□□□ -0.4
SIL1-210ENST00000508639 GOPCQ9HD26 462 aa12.58□□□□□ -0.4
SIL1-210ENST00000508639 NRBP1Q9UHY1 535 aa12.58□□□□□ -0.4
SIL1-210ENST00000508639 ZNF536O15090 1300 aa12.58□□□□□ -0.4
SIL1-210ENST00000508639 MYO9BQ13459 2157 aa12.57□□□□□ -0.4
SIL1-210ENST00000508639 KBTBD13C9JR72 458 aa12.57□□□□□ -0.4
SIL1-210ENST00000508639 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
SIL1-210ENST00000508639 ZMYM1Q5SVZ6 1142 aa12.57□□□□□ -0.4
SIL1-210ENST00000508639 FAM161BQ96MY7 647 aa12.57□□□□□ -0.4
SIL1-210ENST00000508639 SLC38A10Q9HBR0 1119 aa12.57□□□□□ -0.4
SIL1-210ENST00000508639 XPNPEP3Q9NQH7 507 aa12.57□□□□□ -0.4
SIL1-210ENST00000508639 IL17RBQ9NRM6 502 aa12.57□□□□□ -0.4
SIL1-210ENST00000508639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
SIL1-210ENST00000508639 ASTN1O14525 1302 aa12.57□□□□□ -0.4
SIL1-210ENST00000508639 A0A1W2PQ45 241 aaPredicted RBP12.56□□□□□ -0.4
SIL1-210ENST00000508639 A0A1W2PQY0 241 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 RAD21O60216 631 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 CNTN2Q02246 1040 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 FAAP100Q0VG06 881 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 TMEM63BQ5T3F8 832 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 SNRNP48Q6IEG0 339 aaKnown RBP12.56□□□□□ -0.4
SIL1-210ENST00000508639 CCDC129Q6ZRS4 1044 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 C16orf59Q7L2K0 433 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 CPXCR1Q8N123 301 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
SIL1-210ENST00000508639 PRPF38AQ8NAV1 312 aaKnown RBP12.56□□□□□ -0.4
SIL1-210ENST00000508639 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 MKNK2Q9HBH9 465 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 CHD9Q3L8U1 2897 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 SYNRGQ9UMZ2 1314 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 PLIN4Q96Q06 1357 aa12.56□□□□□ -0.4
SIL1-210ENST00000508639 SOWAHBA6NEL2 793 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 KIAA0355O15063 1070 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 NMT2O60551 498 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 NOVP48745 357 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 CDK7P50613 346 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 KCTD2Q14681 263 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 VPS53Q5VIR6 699 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 CHMP4CQ96CF2 233 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 LBHD1Q9BQE6 289 aaPredicted RBP12.55□□□□□ -0.4
SIL1-210ENST00000508639 TEX13BQ9BXU2 312 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 SEMA6BQ9H3T3 888 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
SIL1-210ENST00000508639 SLC5A4Q9NY91 659 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 TTC28Q96AY4 2481 aa12.55□□□□□ -0.4
SIL1-210ENST00000508639 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.54□□□□□ -0.4
SIL1-210ENST00000508639 RARBP10826 455 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 ACLYP53396 1101 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 SNAP25P60880 206 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 CTDSPL2Q05D32 466 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 KCNA10Q16322 511 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 ANKRD33Q7Z3H0 272 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 FAM133AQ8N9E0 248 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 GMCL1P1Q8NEA9 526 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 KIFC2Q96AC6 838 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 AGBL1Q96MI9 1066 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 PURBQ96QR8 312 aaKnown RBP12.54□□□□□ -0.4
SIL1-210ENST00000508639 CDX2Q99626 313 aaPredicted RBP12.54□□□□□ -0.4
SIL1-210ENST00000508639 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
SIL1-210ENST00000508639 SYNGAP1Q96PV0 1343 aa12.54□□□□□ -0.4
SIL1-210ENST00000508639 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
SIL1-210ENST00000508639 AKR1A1P14550 325 aa12.53□□□□□ -0.4
SIL1-210ENST00000508639 SLC4A3P48751 1232 aa12.53□□□□□ -0.4
SIL1-210ENST00000508639 TFAP4Q01664 338 aa12.53□□□□□ -0.4
SIL1-210ENST00000508639 PPARAQ07869 468 aa12.53□□□□□ -0.4
SIL1-210ENST00000508639 ACVR2BQ13705 512 aa12.53□□□□□ -0.4
SIL1-210ENST00000508639 SLFN13Q68D06 897 aa12.53□□□□□ -0.4
SIL1-210ENST00000508639 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
SIL1-210ENST00000508639 ZNF444Q8N0Y2 327 aaPredicted RBP12.53□□□□□ -0.4
SIL1-210ENST00000508639 MSL3Q8N5Y2 521 aaKnown RBP12.53□□□□□ -0.4
SIL1-210ENST00000508639 VWCEQ96DN2 955 aa12.53□□□□□ -0.4
SIL1-210ENST00000508639 DDRGK1Q96HY6 314 aa12.53□□□□□ -0.4
SIL1-210ENST00000508639 TSEN34Q9BSV6 310 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms