RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 ATG4CQ96DT6 458 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 RWDD1Q9H446 243 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 SERPINB13Q9UIV8 391 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 SUPT16HQ9Y5B9 1047 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 LCTP09848 1927 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 UMODL1Q5DID0 1318 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 TTC41PQ6P2S7 1318 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 ERC2O15083 957 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 HLA-DOAP06340 250 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 PGK2P07205 417 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 IGFBP4P22692 258 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 DSG3P32926 999 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 PLCD1P51178 756 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 COG2Q14746 738 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 TMEM132BQ14DG7 1078 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 ABCB5Q2M3G0 1257 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 ZSCAN25Q6NSZ9 544 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 CLEC10AQ8IUN9 316 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 SIAH1Q8IUQ4 282 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 FAM126BQ8IXS8 530 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 HERVK_113Q902F9 699 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 TINF2Q9BSI4 451 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 STARD7Q9NQZ5 370 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 ECHDC1Q9NTX5 307 aa11.08□□□□□ -0.64
UBE2D3-223ENST00000508249 FAM86C2PA6NEL3 165 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 CTAGE5O15320 804 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 IDH1O75874 414 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 CD4P01730 458 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 AKR1A1P14550 325 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 MYOGP15173 224 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 CST5P28325 142 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 PPIGQ13427 754 aaKnown RBP eCLIP11.07□□□□□ -0.645e-7■□□□□ 10
UBE2D3-223ENST00000508249 LRRFIP1Q32MZ4 808 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 CERKLQ49MI3 558 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 PSRC1Q6PGN9 363 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 CCDC129Q6ZRS4 1044 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 REPS2Q8NFH8 660 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 HAUS7Q99871 368 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.07□□□□□ -0.649e-7■■□□□ 13.5
UBE2D3-223ENST00000508249 MROH8Q9H579 483 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 CD320Q9NPF0 282 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 ADAMTS5Q9UNA0 930 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 HCN4Q9Y3Q4 1203 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 ZNF318Q5VUA4 2279 aa11.07□□□□□ -0.64
UBE2D3-223ENST00000508249 MOXD2PA6NHM9 499 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 DCDC2CA8MYV0 355 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 TLL1O43897 1013 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 ARHGEF15O94989 841 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 RABGGTBP53611 331 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 RAB30Q15771 203 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 KCNA10Q16322 511 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 KRT40Q6A162 431 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 NCAPG2Q86XI2 1143 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 MB21D1Q8N884 522 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 MIGA1Q8NAN2 632 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 FGD4Q96M96 766 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 PPP1R12CQ9BZL4 782 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 TANGO6Q9C0B7 1094 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 PAG1Q9NWQ8 432 aa11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 ZNF214Q9UL59 606 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-223ENST00000508249 GPR37L1O60883 481 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 SNAI1O95863 264 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 FCER1AP12319 257 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 POU3F3P20264 500 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 CYP7A1P22680 504 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 CYP2C18P33260 490 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 TMEM31Q5JXX7 168 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 ALYREFQ86V81 257 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 TICAM2Q86XR7 235 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 SMC5Q8IY18 1101 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 EXOC6Q8TAG9 804 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 DNAJC2Q99543 621 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 RIOK1Q9BRS2 568 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 UPF3AQ9H1J1 476 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 WNT8AQ9H1J5 351 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 BOLA2Q9H3K6 86 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 IL23AQ9NPF7 189 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 HOXC10Q9NYD6 342 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 DIS3Q9Y2L1 958 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 MTCH2Q9Y6C9 303 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 ELP1O95163 1332 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 MYO15AQ9UKN7 3530 aa11.05□□□□□ -0.64
UBE2D3-223ENST00000508249 SMIM22K7EJ46 135 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 RFXAPO00287 272 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 GOLIM4O00461 696 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 SMARCA5O60264 1052 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 PLS1Q14651 629 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 UBE3CQ15386 1083 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 RIOX2Q8IUF8 465 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 MICALL1Q8N3F8 863 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 MAGEB6Q8N7X4 407 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 TET1Q8NFU7 2136 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 MMP19Q99542 508 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 KATNBL1Q9H079 304 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 FBXO28Q9NVF7 368 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 SLC5A4Q9NY91 659 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 ASTN1O14525 1302 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms