RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 CYP46A1Q9Y6A2 500 aa26.18■■□□□ 1.78
SNCB-204ENST00000508006 RPS6KB1P23443 525 aa26.17■■□□□ 1.78
SNCB-204ENST00000508006 CHST3Q7LGC8 479 aa26.17■■□□□ 1.78
SNCB-204ENST00000508006 LRRC47Q8N1G4 583 aaKnown RBP26.17■■□□□ 1.78
SNCB-204ENST00000508006 PNMA1Q8ND90 353 aa26.17■■□□□ 1.78
SNCB-204ENST00000508006 DOCK3Q8IZD9 2030 aa26.17■■□□□ 1.78
SNCB-204ENST00000508006 SZT2Q5T011 3432 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 USP17L15C9J2P7 530 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 USP17L13C9JLJ4 530 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 USP17L11C9JVI0 530 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 USP17L18D6R9N7 530 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 USP17L22D6RA61 530 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 USP17L17D6RBQ6 530 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 USP17L19D6RCP7 530 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 USP17L20D6RJB6 530 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 SH2B2O14492 632 aaPredicted RBP26.16■■□□□ 1.78
SNCB-204ENST00000508006 NDUFB10O96000 172 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 GCLCP48506 637 aaPredicted RBP26.16■■□□□ 1.78
SNCB-204ENST00000508006 USP17L24Q0WX57 530 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 SLFN13Q68D06 897 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 DCAF4Q8WV16 495 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 PAWRQ96IZ0 340 aaKnown RBP26.16■■□□□ 1.78
SNCB-204ENST00000508006 LY9Q9HBG7 655 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 PARP14Q460N5 1801 aa26.16■■□□□ 1.78
SNCB-204ENST00000508006 NECAB2Q7Z6G3 386 aa26.15■■□□□ 1.78
SNCB-204ENST00000508006 SGMS1Q86VZ5 419 aa26.15■■□□□ 1.78
SNCB-204ENST00000508006 PAK6Q9NQU5 681 aaPredicted RBP26.15■■□□□ 1.78
SNCB-204ENST00000508006 KIAA1755Q5JYT7 1200 aa26.14■■□□□ 1.78
SNCB-204ENST00000508006 CATSPERGQ6ZRH7 1159 aa26.14■■□□□ 1.78
SNCB-204ENST00000508006 AGXT2Q9BYV1 514 aa26.14■■□□□ 1.78
SNCB-204ENST00000508006 PRO3102Q9H379 93 aa26.14■■□□□ 1.78
SNCB-204ENST00000508006 RPAP3Q9H6T3 665 aaPredicted RBP26.14■■□□□ 1.78
SNCB-204ENST00000508006 RAD21O60216 631 aa26.13■■□□□ 1.77
SNCB-204ENST00000508006 SNHG28P0DPA3 235 aa26.13■■□□□ 1.77
SNCB-204ENST00000508006 BMP3P12645 472 aa26.13■■□□□ 1.77
SNCB-204ENST00000508006 SLC1A4P43007 532 aa26.13■■□□□ 1.77
SNCB-204ENST00000508006 COL9A3Q14050 684 aaPredicted RBP26.13■■□□□ 1.77
SNCB-204ENST00000508006 SPICE1Q8N0Z3 855 aa26.13■■□□□ 1.77
SNCB-204ENST00000508006 TBC1D32Q96NH3 1257 aa26.13■■□□□ 1.77
SNCB-204ENST00000508006 MAP3K14Q99558 947 aa26.13■■□□□ 1.77
SNCB-204ENST00000508006 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.13■■□□□ 1.77
SNCB-204ENST00000508006 ALDH8A1Q9H2A2 487 aaPredicted RBP26.13■■□□□ 1.77
SNCB-204ENST00000508006 RANBP2P49792 3224 aaKnown RBP26.13■■□□□ 1.77
SNCB-204ENST00000508006 CCDC69A6NI79 296 aa26.12■■□□□ 1.77
SNCB-204ENST00000508006 PLA2G6O60733 806 aa26.12■■□□□ 1.77
SNCB-204ENST00000508006 IRX3P78415 501 aaPredicted RBP26.12■■□□□ 1.77
SNCB-204ENST00000508006 FGD1P98174 961 aa26.12■■□□□ 1.77
SNCB-204ENST00000508006 CATIPQ7Z7H3 387 aa26.12■■□□□ 1.77
SNCB-204ENST00000508006 GTF3C2Q8WUA4 911 aaPredicted RBP26.12■■□□□ 1.77
SNCB-204ENST00000508006 CRISPLD2Q9H0B8 497 aa26.12■■□□□ 1.77
SNCB-204ENST00000508006 RLFQ13129 1914 aa26.12■■□□□ 1.77
SNCB-204ENST00000508006 A0A1W2PPC1 479 aa26.11■■□□□ 1.77
SNCB-204ENST00000508006 HMGCRP04035 888 aa26.11■■□□□ 1.77
SNCB-204ENST00000508006 CALM1P0DP23 149 aa26.11■■□□□ 1.77
SNCB-204ENST00000508006 CALM2P0DP24 149 aa26.11■■□□□ 1.77
SNCB-204ENST00000508006 CALM3P0DP25 149 aa26.11■■□□□ 1.77
SNCB-204ENST00000508006 PDHBP11177 359 aa26.11■■□□□ 1.77
SNCB-204ENST00000508006 COG2Q14746 738 aa26.11■■□□□ 1.77
SNCB-204ENST00000508006 GPATCH4Q5T3I0 446 aaKnown RBP26.11■■□□□ 1.77
SNCB-204ENST00000508006 TANGO6Q9C0B7 1094 aa26.11■■□□□ 1.77
SNCB-204ENST00000508006 ASCC2Q9H1I8 757 aaPredicted RBP26.11■■□□□ 1.77
SNCB-204ENST00000508006 HMX1Q9NP08 348 aaPredicted RBP26.11■■□□□ 1.77
SNCB-204ENST00000508006 HOXC10Q9NYD6 342 aa26.11■■□□□ 1.77
SNCB-204ENST00000508006 DDAH1O94760 285 aa26.1■■□□□ 1.77
SNCB-204ENST00000508006 CPA1P15085 419 aa26.1■■□□□ 1.77
SNCB-204ENST00000508006 FAM83BQ5T0W9 1011 aa26.1■■□□□ 1.77
SNCB-204ENST00000508006 LBX2Q6XYB7 198 aa26.1■■□□□ 1.77
SNCB-204ENST00000508006 NFXL1Q6ZNB6 911 aa26.1■■□□□ 1.77
SNCB-204ENST00000508006 Q6ZUG5 572 aa26.1■■□□□ 1.77
SNCB-204ENST00000508006 FEM1BQ9UK73 627 aa26.1■■□□□ 1.77
SNCB-204ENST00000508006 RCAN1P53805 252 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 TROAPQ12815 778 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 ASPRV1Q53RT3 343 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 SYNE3Q6ZMZ3 975 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 FAM160B2Q86V87 743 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 ZNF654Q8IZM8 581 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 CHURC1Q8WUH1 139 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 LRRC2Q9BYS8 371 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 UPF3BQ9BZI7 483 aaKnown RBP26.09■■□□□ 1.77
SNCB-204ENST00000508006 PDRG1Q9NUG6 133 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 SLC12A7Q9Y666 1083 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 RPTORQ8N122 1335 aa26.09■■□□□ 1.77
SNCB-204ENST00000508006 FDX1P10109 184 aa26.08■■□□□ 1.77
SNCB-204ENST00000508006 STAT2P52630 851 aa26.08■■□□□ 1.77
SNCB-204ENST00000508006 EVCP57679 992 aa26.08■■□□□ 1.77
SNCB-204ENST00000508006 ZNF543Q08ER8 600 aa26.08■■□□□ 1.77
SNCB-204ENST00000508006 ANKLE1Q8NAG6 615 aa26.08■■□□□ 1.77
SNCB-204ENST00000508006 PRPF38AQ8NAV1 312 aaKnown RBP26.08■■□□□ 1.77
SNCB-204ENST00000508006 TCEANC2Q96MN5 208 aa26.08■■□□□ 1.77
SNCB-204ENST00000508006 SENP2Q9HC62 589 aa26.08■■□□□ 1.77
SNCB-204ENST00000508006 A0A0G2JMZ2 1700 aa26.08■■□□□ 1.76
SNCB-204ENST00000508006 FLOT1O75955 427 aa26.07■■□□□ 1.76
SNCB-204ENST00000508006 ANKRD1Q15327 319 aa26.07■■□□□ 1.76
SNCB-204ENST00000508006 BTNL9Q6UXG8 535 aa26.07■■□□□ 1.76
SNCB-204ENST00000508006 DIS3LQ8TF46 1054 aaKnown RBP26.07■■□□□ 1.76
SNCB-204ENST00000508006 KIF2CQ99661 725 aa26.07■■□□□ 1.76
SNCB-204ENST00000508006 GPHNQ9NQX3 736 aaPredicted RBP26.07■■□□□ 1.76
SNCB-204ENST00000508006 GJD2Q9UKL4 321 aa26.07■■□□□ 1.76
SNCB-204ENST00000508006 PARP1P09874 1014 aaKnown RBP26.06■■□□□ 1.76
SNCB-204ENST00000508006 DSG3P32926 999 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms