RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 SGSM2O43147 1006 aa18.38■□□□□ 0.53
COL1A1-211ENST00000507689 TFRCP02786 760 aaKnown RBP18.38■□□□□ 0.53
COL1A1-211ENST00000507689 ADORA2AP29274 412 aa18.38■□□□□ 0.53
COL1A1-211ENST00000507689 RALYLQ86SE5 291 aaKnown RBP18.38■□□□□ 0.53
COL1A1-211ENST00000507689 KAT14Q9H8E8 782 aa18.38■□□□□ 0.53
COL1A1-211ENST00000507689 RPTORQ8N122 1335 aa18.38■□□□□ 0.53
COL1A1-211ENST00000507689 ERICH2A1L162 156 aa18.37■□□□□ 0.53
COL1A1-211ENST00000507689 B4E1Z4 1266 aa18.37■□□□□ 0.53
COL1A1-211ENST00000507689 OAZ1P54368 228 aa18.37■□□□□ 0.53
COL1A1-211ENST00000507689 KCTD1Q719H9 257 aa18.37■□□□□ 0.53
COL1A1-211ENST00000507689 DGKHQ86XP1 1220 aa18.37■□□□□ 0.53
COL1A1-211ENST00000507689 TRIB2Q92519 343 aa18.37■□□□□ 0.53
COL1A1-211ENST00000507689 TMEM47Q9BQJ4 181 aa18.37■□□□□ 0.53
COL1A1-211ENST00000507689 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.37■□□□□ 0.53
COL1A1-211ENST00000507689 FBXO40Q9UH90 709 aa18.37■□□□□ 0.53
COL1A1-211ENST00000507689 NEDD4P46934 1319 aa18.37■□□□□ 0.53
COL1A1-211ENST00000507689 PLA2G6O60733 806 aa18.36■□□□□ 0.53
COL1A1-211ENST00000507689 PRKAR2AP13861 404 aaKnown RBP18.36■□□□□ 0.53
COL1A1-211ENST00000507689 GJA8P48165 433 aa18.36■□□□□ 0.53
COL1A1-211ENST00000507689 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
COL1A1-211ENST00000507689 ERICH6BQ5W0A0 696 aa18.36■□□□□ 0.53
COL1A1-211ENST00000507689 U2AF1L4Q8WU68 220 aaKnown RBP18.36■□□□□ 0.53
COL1A1-211ENST00000507689 USP6NLQ92738 828 aa18.36■□□□□ 0.53
COL1A1-211ENST00000507689 DDX11Q96FC9 970 aa18.36■□□□□ 0.53
COL1A1-211ENST00000507689 DEFB118Q96PH6 123 aa18.36■□□□□ 0.53
COL1A1-211ENST00000507689 ZSCAN10Q96SZ4 725 aaPredicted RBP18.36■□□□□ 0.53
COL1A1-211ENST00000507689 ZKSCAN3Q9BRR0 538 aa18.36■□□□□ 0.53
COL1A1-211ENST00000507689 NBPF3Q9H094 633 aa18.36■□□□□ 0.53
COL1A1-211ENST00000507689 SGPL1O95470 568 aa18.35■□□□□ 0.53
COL1A1-211ENST00000507689 HOXC6P09630 235 aa18.35■□□□□ 0.53
COL1A1-211ENST00000507689 SLC38A10Q9HBR0 1119 aa18.35■□□□□ 0.53
COL1A1-211ENST00000507689 RAVER2Q9HCJ3 691 aaKnown RBP18.35■□□□□ 0.53
COL1A1-211ENST00000507689 PNMA2Q9UL42 364 aa18.35■□□□□ 0.53
COL1A1-211ENST00000507689 ZNF214Q9UL59 606 aaPredicted RBP18.35■□□□□ 0.53
COL1A1-211ENST00000507689 TACC3Q9Y6A5 838 aa18.35■□□□□ 0.53
COL1A1-211ENST00000507689 ATP2A1O14983 1001 aa18.34■□□□□ 0.53
COL1A1-211ENST00000507689 NOVP48745 357 aa18.34■□□□□ 0.53
COL1A1-211ENST00000507689 CHST13Q8NET6 341 aa18.34■□□□□ 0.53
COL1A1-211ENST00000507689 NCOA7Q8NI08 942 aa18.34■□□□□ 0.53
COL1A1-211ENST00000507689 ANO2Q9NQ90 1003 aa18.34■□□□□ 0.53
COL1A1-211ENST00000507689 ZSWIM5Q9P217 1185 aa18.34■□□□□ 0.53
COL1A1-211ENST00000507689 A0A0G2JMZ2 1700 aa18.34■□□□□ 0.53
COL1A1-211ENST00000507689 RBBP6Q7Z6E9 1792 aaKnown RBP18.33■□□□□ 0.53
COL1A1-211ENST00000507689 CDC45O75419 566 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 CNGA1P29973 690 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 PTH1RQ03431 593 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 CCL14Q16627 93 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 GPATCH4Q5T3I0 446 aaKnown RBP18.33■□□□□ 0.52
COL1A1-211ENST00000507689 IFIT1BQ5T764 474 aaKnown RBP18.33■□□□□ 0.52
COL1A1-211ENST00000507689 OLFML2BQ68BL8 750 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 ESYT1Q9BSJ8 1104 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 IL25Q9H293 177 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 GPCPD1Q9NPB8 672 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 PAK6Q9NQU5 681 aaPredicted RBP18.33■□□□□ 0.52
COL1A1-211ENST00000507689 PPP4R2Q9NY27 417 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 LAMA4Q16363 1823 aa18.33■□□□□ 0.52
COL1A1-211ENST00000507689 TNKSO95271 1327 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 FRMPD2Q68DX3 1309 aaPredicted RBP18.32■□□□□ 0.52
COL1A1-211ENST00000507689 MSCO60682 206 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
COL1A1-211ENST00000507689 SYDE2Q5VT97 1194 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 RNF20Q5VTR2 975 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 CCDC174Q6PII3 467 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 PNMA1Q8ND90 353 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 REPS2Q8NFH8 660 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 MAP4K1Q92918 833 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 HOMER2Q9NSB8 354 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 PRR12Q9ULL5 1215 aa18.32■□□□□ 0.52
COL1A1-211ENST00000507689 RBM8AQ9Y5S9 174 aaKnown RBP18.32■□□□□ 0.52
COL1A1-211ENST00000507689 FARP2O94887 1054 aaPredicted RBP18.31■□□□□ 0.52
COL1A1-211ENST00000507689 CYP21A2P08686 494 aa18.31■□□□□ 0.52
COL1A1-211ENST00000507689 PDHBP11177 359 aa18.31■□□□□ 0.52
COL1A1-211ENST00000507689 TRIM32Q13049 653 aa18.31■□□□□ 0.52
COL1A1-211ENST00000507689 NPLOC4Q8TAT6 608 aa18.31■□□□□ 0.52
COL1A1-211ENST00000507689 HTATIP2Q9BUP3 242 aa18.31■□□□□ 0.52
COL1A1-211ENST00000507689 ACAD9Q9H845 621 aa18.31■□□□□ 0.52
COL1A1-211ENST00000507689 CCPG1Q9ULG6 757 aa18.31■□□□□ 0.52
COL1A1-211ENST00000507689 DIS3Q9Y2L1 958 aaKnown RBP18.31■□□□□ 0.52
COL1A1-211ENST00000507689 DOCK3Q8IZD9 2030 aa18.31■□□□□ 0.52
COL1A1-211ENST00000507689 RLFQ13129 1914 aa18.31■□□□□ 0.52
COL1A1-211ENST00000507689 IFIT3O14879 490 aaKnown RBP18.3■□□□□ 0.52
COL1A1-211ENST00000507689 DHX16O60231 1041 aaKnown RBP18.3■□□□□ 0.52
COL1A1-211ENST00000507689 ALAS1P13196 640 aa18.3■□□□□ 0.52
COL1A1-211ENST00000507689 ZNF543Q08ER8 600 aa18.3■□□□□ 0.52
COL1A1-211ENST00000507689 MAP3K21Q5TCX8 1036 aa18.3■□□□□ 0.52
COL1A1-211ENST00000507689 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
COL1A1-211ENST00000507689 PARP14Q460N5 1801 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 E7EWF7 191 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 COBLO75128 1261 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 PGK2P07205 417 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 PARP1P09874 1014 aaKnown RBP18.29■□□□□ 0.52
COL1A1-211ENST00000507689 CYP2C19P33261 490 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 SLC16A2P36021 539 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 ASPRV1Q53RT3 343 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 BTNL9Q6UXG8 535 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 ENAHQ8N8S7 591 aaPredicted RBP18.29■□□□□ 0.52
COL1A1-211ENST00000507689 ANKLE1Q8NAG6 615 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 ANKS1AQ92625 1134 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms