RNA–Protein interactions for RNA: ENST00000506827.1

ITGA3-209, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-209ENST00000506827 IFNL1Q8IU54 200 aa17.18■□□□□ 0.34
ITGA3-209ENST00000506827 CCDC144CPQ8IYA2 1237 aa17.18■□□□□ 0.34
ITGA3-209ENST00000506827 STAG2Q8N3U4 1231 aa17.18■□□□□ 0.34
ITGA3-209ENST00000506827 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
ITGA3-209ENST00000506827 PARK7Q99497 189 aaKnown RBP17.18■□□□□ 0.34
ITGA3-209ENST00000506827 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
ITGA3-209ENST00000506827 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
ITGA3-209ENST00000506827 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
ITGA3-209ENST00000506827 ATAD5Q96QE3 1844 aa17.18■□□□□ 0.34
ITGA3-209ENST00000506827 ZBED4O75132 1171 aa17.17■□□□□ 0.34
ITGA3-209ENST00000506827 CD2BP2O95400 341 aaKnown RBP17.17■□□□□ 0.34
ITGA3-209ENST00000506827 IFNAR1P17181 557 aa17.17■□□□□ 0.34
ITGA3-209ENST00000506827 ADD1P35611 737 aaKnown RBP17.17■□□□□ 0.34
ITGA3-209ENST00000506827 AKAP17AQ02040 695 aaKnown RBP17.17■□□□□ 0.34
ITGA3-209ENST00000506827 SCRN1Q12765 414 aa17.17■□□□□ 0.34
ITGA3-209ENST00000506827 DGKZQ13574 1117 aa17.17■□□□□ 0.34
ITGA3-209ENST00000506827 LBX2Q6XYB7 198 aa17.17■□□□□ 0.34
ITGA3-209ENST00000506827 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
ITGA3-209ENST00000506827 PTPN18Q99952 460 aa17.17■□□□□ 0.34
ITGA3-209ENST00000506827 ASCC2Q9H1I8 757 aaPredicted RBP17.17■□□□□ 0.34
ITGA3-209ENST00000506827 RIOX1Q9H6W3 641 aa17.17■□□□□ 0.34
ITGA3-209ENST00000506827 FAM217BQ9NTX9 383 aaPredicted RBP17.17■□□□□ 0.34
ITGA3-209ENST00000506827 CTDP1Q9Y5B0 961 aaPredicted RBP17.17■□□□□ 0.34
ITGA3-209ENST00000506827 CDC27P30260 824 aa17.16■□□□□ 0.34
ITGA3-209ENST00000506827 DSG3P32926 999 aa17.16■□□□□ 0.34
ITGA3-209ENST00000506827 GCLCP48506 637 aaPredicted RBP17.16■□□□□ 0.34
ITGA3-209ENST00000506827 TRIM22Q8IYM9 498 aa17.16■□□□□ 0.34
ITGA3-209ENST00000506827 KIFC2Q96AC6 838 aa17.16■□□□□ 0.34
ITGA3-209ENST00000506827 RRP36Q96EU6 259 aaKnown RBP17.16■□□□□ 0.34
ITGA3-209ENST00000506827 PRR12Q9ULL5 1215 aa17.16■□□□□ 0.34
ITGA3-209ENST00000506827 ADAMTS5Q9UNA0 930 aa17.16■□□□□ 0.34
ITGA3-209ENST00000506827 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.16■□□□□ 0.34
ITGA3-209ENST00000506827 SLC16A2P36021 539 aa17.15■□□□□ 0.34
ITGA3-209ENST00000506827 OAZ1P54368 228 aa17.15■□□□□ 0.34
ITGA3-209ENST00000506827 TTBK2Q6IQ55 1244 aa17.15■□□□□ 0.34
ITGA3-209ENST00000506827 ADGRF4Q8IZF3 695 aa17.15■□□□□ 0.34
ITGA3-209ENST00000506827 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
ITGA3-209ENST00000506827 SRBD1Q8N5C6 995 aaKnown RBP17.15■□□□□ 0.34
ITGA3-209ENST00000506827 NECAB1Q8N987 351 aa17.15■□□□□ 0.34
ITGA3-209ENST00000506827 SMCR8Q8TEV9 937 aaPredicted RBP17.15■□□□□ 0.34
ITGA3-209ENST00000506827 P2RX7Q99572 595 aaKnown RBP17.15■□□□□ 0.34
ITGA3-209ENST00000506827 RNF26Q9BY78 433 aaPredicted RBP17.15■□□□□ 0.34
ITGA3-209ENST00000506827 UBA5Q9GZZ9 404 aa17.15■□□□□ 0.34
ITGA3-209ENST00000506827 NCOA5Q9HCD5 579 aaKnown RBP17.15■□□□□ 0.34
ITGA3-209ENST00000506827 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
ITGA3-209ENST00000506827 AOC2O75106 756 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 HERVK_113P62684 666 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 HMGN5P82970 282 aaKnown RBP17.14■□□□□ 0.33
ITGA3-209ENST00000506827 HTRA3P83110 453 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 SSRP1Q08945 709 aaKnown RBP17.14■□□□□ 0.33
ITGA3-209ENST00000506827 CUL4AQ13619 759 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 NTRK3Q16288 839 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 RASGRP2Q7LDG7 609 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 INTS4Q96HW7 963 aaKnown RBP17.14■□□□□ 0.33
ITGA3-209ENST00000506827 JMJD4Q9H9V9 463 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 ZFYVE28Q9HCC9 887 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 FBXO28Q9NVF7 368 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 KIF3AQ9Y496 699 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 PHIPQ8WWQ0 1821 aa17.14■□□□□ 0.33
ITGA3-209ENST00000506827 PNMA6FA0A0J9YX94 578 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
ITGA3-209ENST00000506827 IGF2BP3O00425 579 aaKnown RBP eCLIP17.13■□□□□ 0.33
ITGA3-209ENST00000506827 VWA5AO00534 786 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 ZBTB5O15062 677 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 PRPF3O43395 683 aaKnown RBP17.13■□□□□ 0.33
ITGA3-209ENST00000506827 LARGE1O95461 756 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 FUT2Q10981 343 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 CCDC83Q8IWF9 413 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 WASF1Q92558 559 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 MTMR8Q96EF0 704 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 RANBP17Q9H2T7 1088 aaKnown RBP17.13■□□□□ 0.33
ITGA3-209ENST00000506827 SLC38A10Q9HBR0 1119 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 RABGAP1Q9Y3P9 1069 aa17.13■□□□□ 0.33
ITGA3-209ENST00000506827 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
ITGA3-209ENST00000506827 ATP2A1O14983 1001 aa17.12■□□□□ 0.33
ITGA3-209ENST00000506827 CA12O43570 354 aa17.12■□□□□ 0.33
ITGA3-209ENST00000506827 CYTH3O43739 400 aa17.12■□□□□ 0.33
ITGA3-209ENST00000506827 FMNL1O95466 1100 aaPredicted RBP17.12■□□□□ 0.33
ITGA3-209ENST00000506827 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
ITGA3-209ENST00000506827 MAP2K1Q02750 393 aaPredicted RBP17.12■□□□□ 0.33
ITGA3-209ENST00000506827 TAF1CQ15572 869 aaPredicted RBP17.12■□□□□ 0.33
ITGA3-209ENST00000506827 NBPF11Q86T75 865 aa17.12■□□□□ 0.33
ITGA3-209ENST00000506827 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
ITGA3-209ENST00000506827 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
ITGA3-209ENST00000506827 ATG4CQ96DT6 458 aa17.12■□□□□ 0.33
ITGA3-209ENST00000506827 ZIC5Q96T25 663 aa17.12■□□□□ 0.33
ITGA3-209ENST00000506827 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
ITGA3-209ENST00000506827 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
ITGA3-209ENST00000506827 STK36Q9NRP7 1315 aa17.12■□□□□ 0.33
ITGA3-209ENST00000506827 DEXIO95424 95 aa17.11■□□□□ 0.33
ITGA3-209ENST00000506827 CYP2C8P10632 490 aa17.11■□□□□ 0.33
ITGA3-209ENST00000506827 COPB2P35606 906 aa17.11■□□□□ 0.33
ITGA3-209ENST00000506827 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
ITGA3-209ENST00000506827 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
ITGA3-209ENST00000506827 FAM177A1Q8N128 213 aaPredicted RBP17.11■□□□□ 0.33
ITGA3-209ENST00000506827 CMTR1Q8N1G2 835 aaKnown RBP17.11■□□□□ 0.33
ITGA3-209ENST00000506827 NSUN7Q8NE18 718 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms