RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 SDSP20132 328 aa18.38■□□□□ 0.53
DDR1-258ENST00000506573 NT5C2P49902 561 aa18.38■□□□□ 0.53
DDR1-258ENST00000506573 STAT2P52630 851 aa18.38■□□□□ 0.53
DDR1-258ENST00000506573 OAZ1P54368 228 aa18.38■□□□□ 0.53
DDR1-258ENST00000506573 NMIQ13287 307 aaPredicted RBP18.38■□□□□ 0.53
DDR1-258ENST00000506573 LHX8Q68G74 356 aa18.38■□□□□ 0.53
DDR1-258ENST00000506573 PLEKHM2Q8IWE5 1019 aa18.38■□□□□ 0.53
DDR1-258ENST00000506573 MAML3Q96JK9 1138 aa18.38■□□□□ 0.53
DDR1-258ENST00000506573 RNF41Q9H4P4 317 aaPredicted RBP18.38■□□□□ 0.53
DDR1-258ENST00000506573 COLQQ9Y215 455 aaPredicted RBP18.38■□□□□ 0.53
DDR1-258ENST00000506573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDR1-258ENST00000506573 CEP290O15078 2479 aa18.38■□□□□ 0.53
DDR1-258ENST00000506573 ATP2A1O14983 1001 aa18.37■□□□□ 0.53
DDR1-258ENST00000506573 HSPD1P10809 573 aaKnown RBP18.37■□□□□ 0.53
DDR1-258ENST00000506573 CYBAP13498 195 aa18.37■□□□□ 0.53
DDR1-258ENST00000506573 SLC4A3P48751 1232 aa18.37■□□□□ 0.53
DDR1-258ENST00000506573 VPS53Q5VIR6 699 aa18.37■□□□□ 0.53
DDR1-258ENST00000506573 CHRDL2Q6WN34 429 aa18.37■□□□□ 0.53
DDR1-258ENST00000506573 CPXCR1Q8N123 301 aa18.37■□□□□ 0.53
DDR1-258ENST00000506573 GREB1LQ9C091 1923 aaPredicted RBP18.37■□□□□ 0.53
DDR1-258ENST00000506573 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
DDR1-258ENST00000506573 SEPT4O43236 478 aa18.36■□□□□ 0.53
DDR1-258ENST00000506573 RRP12Q5JTH9 1297 aaKnown RBP18.36■□□□□ 0.53
DDR1-258ENST00000506573 MFSD6Q6ZSS7 791 aa18.36■□□□□ 0.53
DDR1-258ENST00000506573 MSL3Q8N5Y2 521 aaKnown RBP18.36■□□□□ 0.53
DDR1-258ENST00000506573 CHST13Q8NET6 341 aa18.36■□□□□ 0.53
DDR1-258ENST00000506573 REPS2Q8NFH8 660 aa18.36■□□□□ 0.53
DDR1-258ENST00000506573 SLC38A10Q9HBR0 1119 aa18.36■□□□□ 0.53
DDR1-258ENST00000506573 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
DDR1-258ENST00000506573 RLFQ13129 1914 aa18.35■□□□□ 0.53
DDR1-258ENST00000506573 KBTBD13C9JR72 458 aa18.35■□□□□ 0.53
DDR1-258ENST00000506573 DNM1LO00429 736 aa18.35■□□□□ 0.53
DDR1-258ENST00000506573 C7orf61Q8IZ16 206 aa18.35■□□□□ 0.53
DDR1-258ENST00000506573 ANKRD35Q8N283 1001 aa18.35■□□□□ 0.53
DDR1-258ENST00000506573 STAG1Q8WVM7 1258 aa18.35■□□□□ 0.53
DDR1-258ENST00000506573 TINF2Q9BSI4 451 aa18.35■□□□□ 0.53
DDR1-258ENST00000506573 ZNF213O14771 459 aa18.34■□□□□ 0.53
DDR1-258ENST00000506573 FOXP2O15409 715 aa18.34■□□□□ 0.53
DDR1-258ENST00000506573 PLA2G6O60733 806 aa18.34■□□□□ 0.53
DDR1-258ENST00000506573 PGK2P07205 417 aa18.34■□□□□ 0.53
DDR1-258ENST00000506573 FGRP09769 529 aa18.34■□□□□ 0.53
DDR1-258ENST00000506573 MCCP23508 829 aa18.34■□□□□ 0.53
DDR1-258ENST00000506573 RCSD1Q6JBY9 416 aa18.34■□□□□ 0.53
DDR1-258ENST00000506573 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
DDR1-258ENST00000506573 RAVER2Q9HCJ3 691 aaKnown RBP18.34■□□□□ 0.53
DDR1-258ENST00000506573 CTNNA3Q9UI47 895 aa18.34■□□□□ 0.53
DDR1-258ENST00000506573 IGHA2P01877 340 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 RARBP10826 455 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 COL6A1P12109 1028 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 MNX1P50219 401 aaPredicted RBP18.33■□□□□ 0.52
DDR1-258ENST00000506573 CCDC96Q2M329 555 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 ZNF792Q3KQV3 632 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 CCDC178Q5BJE1 867 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 AKNAD1Q5T1N1 836 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 ZNF589Q86UQ0 364 aaPredicted RBP18.33■□□□□ 0.52
DDR1-258ENST00000506573 DCAF4Q8WV16 495 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 ESR2Q92731 530 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 SENP6Q9GZR1 1112 aaPredicted RBP18.33■□□□□ 0.52
DDR1-258ENST00000506573 TCP11L1Q9NUJ3 509 aa18.33■□□□□ 0.52
DDR1-258ENST00000506573 MYH4Q9Y623 1939 aa18.32■□□□□ 0.52
DDR1-258ENST00000506573 A0A1W2PPC1 479 aa18.32■□□□□ 0.52
DDR1-258ENST00000506573 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
DDR1-258ENST00000506573 TOP1P11387 765 aaKnown RBP18.32■□□□□ 0.52
DDR1-258ENST00000506573 TRPV1Q8NER1 839 aa18.32■□□□□ 0.52
DDR1-258ENST00000506573 TTC14Q96N46 770 aa18.32■□□□□ 0.52
DDR1-258ENST00000506573 IL17RBQ9NRM6 502 aa18.32■□□□□ 0.52
DDR1-258ENST00000506573 PNMA2Q9UL42 364 aa18.32■□□□□ 0.52
DDR1-258ENST00000506573 SYNGAP1Q96PV0 1343 aa18.31■□□□□ 0.52
DDR1-258ENST00000506573 HAND2P61296 217 aa18.31■□□□□ 0.52
DDR1-258ENST00000506573 IMMTQ16891 758 aaKnown RBP18.31■□□□□ 0.52
DDR1-258ENST00000506573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.31■□□□□ 0.52
DDR1-258ENST00000506573 ZNF467Q7Z7K2 595 aaPredicted RBP18.31■□□□□ 0.52
DDR1-258ENST00000506573 ACAD9Q9H845 621 aa18.31■□□□□ 0.52
DDR1-258ENST00000506573 INCENPQ9NQS7 918 aa18.31■□□□□ 0.52
DDR1-258ENST00000506573 PRKAG2Q9UGJ0 569 aa18.31■□□□□ 0.52
DDR1-258ENST00000506573 MTMR7Q9Y216 660 aa18.31■□□□□ 0.52
DDR1-258ENST00000506573 PARP14Q460N5 1801 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 PFASO15067 1338 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 NMT2O60551 498 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 AKR1A1P14550 325 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 PRAMEF19Q5SWL8 479 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 KCTD1Q719H9 257 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 RNF180Q86T96 592 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 IQCA1Q86XH1 822 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 HOMER2Q9NSB8 354 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
DDR1-258ENST00000506573 RIPK3Q9Y572 518 aa18.3■□□□□ 0.52
DDR1-258ENST00000506573 NOVP48745 357 aa18.29■□□□□ 0.52
DDR1-258ENST00000506573 GJC2Q5T442 439 aaPredicted RBP18.29■□□□□ 0.52
DDR1-258ENST00000506573 DSCC1Q9BVC3 393 aa18.29■□□□□ 0.52
DDR1-258ENST00000506573 XPNPEP3Q9NQH7 507 aa18.29■□□□□ 0.52
DDR1-258ENST00000506573 FAM184BQ9ULE4 1060 aa18.29■□□□□ 0.52
DDR1-258ENST00000506573 ZMYND8Q9ULU4 1186 aaPredicted RBP18.29■□□□□ 0.52
DDR1-258ENST00000506573 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
DDR1-258ENST00000506573 POTEB2H3BUK9 544 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 ANO1Q5XXA6 986 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 MAMDC4Q6UXC1 1216 aa18.28■□□□□ 0.52
DDR1-258ENST00000506573 CHMP4CQ96CF2 233 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms