RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SERPINA10Q9UK55 444 aa13.93□□□□□ -0.18
LIN54-206ENST00000506560 PP2D1A8MPX8 630 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 GOLGA6L19H0YKK7 550 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 PTGS1P23219 599 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 AFMP43652 599 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 NCAPHQ15003 741 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 FAM13BQ9NYF5 915 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.92□□□□□ -0.18
LIN54-206ENST00000506560 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 GREB1LQ9C091 1923 aaPredicted RBP13.92□□□□□ -0.18
LIN54-206ENST00000506560 SMCO2A6NFE2 343 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 SNHG28P0DPA3 235 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 EEF2P13639 858 aaKnown RBP13.92□□□□□ -0.18
LIN54-206ENST00000506560 TAL1P17542 331 aaPredicted RBP13.92□□□□□ -0.18
LIN54-206ENST00000506560 NT5C2P49902 561 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 FKBP1AP62942 108 aaKnown RBP13.92□□□□□ -0.18
LIN54-206ENST00000506560 CCDC144BQ3MJ40 725 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
LIN54-206ENST00000506560 RRP36Q96EU6 259 aaKnown RBP13.92□□□□□ -0.18
LIN54-206ENST00000506560 RIOX1Q9H6W3 641 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 SH3GLB2Q9NR46 395 aa13.92□□□□□ -0.18
LIN54-206ENST00000506560 BIN2Q9UBW5 565 aaPredicted RBP13.92□□□□□ -0.18
LIN54-206ENST00000506560 CCDC194A0A1B0GVG4 234 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 CALML3P27482 149 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 POSTNQ15063 836 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 HSP90AA4PQ58FG1 418 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 JAKMIP3Q5VZ66 844 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 FBXO41Q8TF61 875 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 HSD3B7Q9H2F3 369 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 SNAP25P60880 206 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 HDLBPQ00341 1268 aaKnown RBP13.91□□□□□ -0.18
LIN54-206ENST00000506560 ZNF543Q08ER8 600 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 LRMPQ12912 555 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 ARID5BQ14865 1188 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 PTPN21Q16825 1174 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 CCDC96Q2M329 555 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 CERKLQ49MI3 558 aaPredicted RBP13.91□□□□□ -0.18
LIN54-206ENST00000506560 NUP88Q99567 741 aaPredicted RBP13.91□□□□□ -0.18
LIN54-206ENST00000506560 MRIQ9BWK5 157 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 ZMYND12Q9H0C1 365 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 EHD4Q9H223 541 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 JMJD4Q9H9V9 463 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 PI4KBQ9UBF8 816 aa13.91□□□□□ -0.18
LIN54-206ENST00000506560 USP17L10C9JJH3 530 aa13.9□□□□□ -0.18
LIN54-206ENST00000506560 ATP1A3P13637 1013 aa13.9□□□□□ -0.18
LIN54-206ENST00000506560 ZRSR1Q15695 479 aaKnown RBP13.9□□□□□ -0.18
LIN54-206ENST00000506560 ADGRF4Q8IZF3 695 aa13.9□□□□□ -0.18
LIN54-206ENST00000506560 MAN1B1Q9UKM7 699 aa13.9□□□□□ -0.18
LIN54-206ENST00000506560 LMOD1P29536 600 aaPredicted RBP13.9□□□□□ -0.18
LIN54-206ENST00000506560 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.18
LIN54-206ENST00000506560 RSBN1LQ6PCB5 846 aaPredicted RBP13.9□□□□□ -0.18
LIN54-206ENST00000506560 CCDC186Q7Z3E2 898 aa13.9□□□□□ -0.18
LIN54-206ENST00000506560 GMLQ99445 158 aa13.9□□□□□ -0.18
LIN54-206ENST00000506560 LZTS2Q9BRK4 669 aa13.9□□□□□ -0.18
LIN54-206ENST00000506560 SEC63Q9UGP8 760 aaKnown RBP13.9□□□□□ -0.18
LIN54-206ENST00000506560 PYCARDQ9ULZ3 195 aa13.9□□□□□ -0.18
LIN54-206ENST00000506560 DRC7Q8IY82 874 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 SUPT20HQ8NEM7 779 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 CCDC148Q8NFR7 591 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 PLIN2Q99541 437 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 MTRQ99707 1265 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 SMCHD1A6NHR9 2005 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 EDIL3O43854 480 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 CAVIN2O95810 425 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 DAGLBQ8NCG7 672 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 LRRC15Q8TF66 581 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 CSRNP1Q96S65 589 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 PSMD1Q99460 953 aa13.89□□□□□ -0.19
LIN54-206ENST00000506560 UBE2SQ16763 222 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 LETM2Q2VYF4 491 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 ASPRV1Q53RT3 343 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 TRMT44Q8IYL2 757 aaKnown RBP13.88□□□□□ -0.19
LIN54-206ENST00000506560 SMYD4Q8IYR2 804 aaPredicted RBP13.88□□□□□ -0.19
LIN54-206ENST00000506560 RTKN2Q8IZC4 609 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 FERMT2Q96AC1 680 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 MED15Q96RN5 788 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 BLZF1Q9H2G9 400 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 DHX36Q9H2U1 1008 aaKnown RBP13.88□□□□□ -0.19
LIN54-206ENST00000506560 EGFRP00533 1210 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 GH2P01242 217 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 VIL1P09327 827 aaKnown RBP13.88□□□□□ -0.19
LIN54-206ENST00000506560 TRAPPC10P48553 1259 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 FMR1Q06787 632 aaKnown RBP eCLIP13.88□□□□□ -0.19
LIN54-206ENST00000506560 TATDN1Q6P1N9 297 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 PAGE5Q96GU1 130 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 UIMC1Q96RL1 719 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 PSME4Q14997 1843 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 MYO3BQ8WXR4 1341 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 A0A1W2PRG0 241 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 SARSP49591 514 aaKnown RBP13.88□□□□□ -0.19
LIN54-206ENST00000506560 CXCL9Q07325 125 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 KARSQ15046 597 aaKnown RBP13.88□□□□□ -0.19
LIN54-206ENST00000506560 VEZTQ9HBM0 779 aa13.88□□□□□ -0.19
LIN54-206ENST00000506560 COBLO75128 1261 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 ICA1Q05084 483 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 E2F4Q16254 413 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 SARM1Q6SZW1 724 aa13.87□□□□□ -0.19
LIN54-206ENST00000506560 SPICE1Q8N0Z3 855 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms