RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CDC45O75419 566 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 BCRP11274 1271 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 PSMC4P43686 418 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 FCGRTP55899 365 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 HERVK_113P62684 666 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 PTH1RQ03431 593 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 KLRC3Q07444 240 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 TRDNQ13061 729 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 FAM110CQ1W6H9 321 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 CCDC178Q5BJE1 867 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 IQCA1Q86XH1 822 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 CCAR1Q8IX12 1150 aaKnown RBP8.57□□□□□ -1.04
GYPB-206ENST00000506516 SPICE1Q8N0Z3 855 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 GPRC5AQ8NFJ5 357 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 MAP4K1Q92918 833 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 TTC14Q96N46 770 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 KRT23Q9C075 422 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 TANGO6Q9C0B7 1094 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 IL25Q9H293 177 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 CNNM2Q9H8M5 875 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 TCP11L1Q9NUJ3 509 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 STX8Q9UNK0 236 aa8.57□□□□□ -1.04
GYPB-206ENST00000506516 ADGRA2Q96PE1 1338 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 PRMT2P55345 433 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 FBXO46Q6PJ61 603 aaPredicted RBP8.56□□□□□ -1.04
GYPB-206ENST00000506516 OTOP1Q7RTM1 612 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 ZNF687Q8N1G0 1237 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 MCOLN1Q9GZU1 580 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 ANO2Q9NQ90 1003 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 IL17RBQ9NRM6 502 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 PLIN4Q96Q06 1357 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 BAZ2AQ9UIF9 1905 aaKnown RBP8.56□□□□□ -1.04
GYPB-206ENST00000506516 LAMB1P07942 1786 aa8.56□□□□□ -1.04
GYPB-206ENST00000506516 TNPO2O14787 897 aaKnown RBP8.55□□□□□ -1.04
GYPB-206ENST00000506516 FLOT1O75955 427 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 NDUFB10O96000 172 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 PTPREP23469 700 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 ERVK-9P63128 1117 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 ERVK-24P63145 666 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 CCNA1P78396 465 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 AMHR2Q16671 573 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 KIAA1755Q5JYT7 1200 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 RNF20Q5VTR2 975 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 SLFN13Q68D06 897 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 PADI6Q6TGC4 694 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 LBX2Q6XYB7 198 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 TBC1D10CQ8IV04 446 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 MB21D1Q8N884 522 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 PRPF38AQ8NAV1 312 aaKnown RBP8.55□□□□□ -1.04
GYPB-206ENST00000506516 GMCL1P1Q8NEA9 526 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 COA7Q96BR5 231 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 PAGR1Q9BTK6 254 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 CWC22Q9HCG8 908 aaKnown RBP8.55□□□□□ -1.04
GYPB-206ENST00000506516 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 RBM27Q9P2N5 1060 aaKnown RBP8.55□□□□□ -1.04
GYPB-206ENST00000506516 RBPJLQ9UBG7 517 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 MORF4L1Q9UBU8 362 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 PTPN22Q9Y2R2 807 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 RABGAP1Q9Y3P9 1069 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 RBM8AQ9Y5S9 174 aaKnown RBP8.55□□□□□ -1.04
GYPB-206ENST00000506516 TACC3Q9Y6A5 838 aa8.55□□□□□ -1.04
GYPB-206ENST00000506516 MYPNQ86TC9 1320 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 PHIPQ8WWQ0 1821 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 ATAD5Q96QE3 1844 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 B4E1Z4 1266 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 NMT2O60551 498 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 KDM4AO75164 1064 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 CYP21A2P08686 494 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 TOP1P11387 765 aaKnown RBP8.54□□□□□ -1.04
GYPB-206ENST00000506516 BMP3P12645 472 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 MAPK4P31152 587 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 SLC1A4P43007 532 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 NOVP48745 357 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 FAM83BQ5T0W9 1011 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 RALYLQ86SE5 291 aaKnown RBP8.54□□□□□ -1.04
GYPB-206ENST00000506516 NBPF11Q86T75 865 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 DGKHQ86XP1 1220 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 LRRC47Q8N1G4 583 aaKnown RBP8.54□□□□□ -1.04
GYPB-206ENST00000506516 NCOA7Q8NI08 942 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 CHURC1Q8WUH1 139 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 TRIM47Q96LD4 638 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 TMEM47Q9BQJ4 181 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 UBAC1Q9BSL1 405 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 ARHGAP39Q9C0H5 1083 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 LSG1Q9H089 658 aaKnown RBP8.54□□□□□ -1.04
GYPB-206ENST00000506516 NBPF3Q9H094 633 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 SRRDQ9UH36 339 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 FEM1BQ9UK73 627 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 ISY1Q9ULR0 285 aaKnown RBP8.54□□□□□ -1.04
GYPB-206ENST00000506516 CTDP1Q9Y5B0 961 aaPredicted RBP8.54□□□□□ -1.04
GYPB-206ENST00000506516 NEDD4P46934 1319 aa8.54□□□□□ -1.04
GYPB-206ENST00000506516 ERICH2A1L162 156 aa8.53□□□□□ -1.04
GYPB-206ENST00000506516 E7EWF7 191 aa8.53□□□□□ -1.04
GYPB-206ENST00000506516 EIF5BO60841 1220 aaKnown RBP8.53□□□□□ -1.04
GYPB-206ENST00000506516 ZBED4O75132 1171 aa8.53□□□□□ -1.04
GYPB-206ENST00000506516 FDX1P10109 184 aa8.53□□□□□ -1.04
GYPB-206ENST00000506516 COL9A1P20849 921 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms