RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 KCTD2Q14681 263 aa20.51■□□□□ 0.87
AP3S1-204ENST00000506430 SLFN13Q68D06 897 aa20.51■□□□□ 0.87
AP3S1-204ENST00000506430 SNRNP48Q6IEG0 339 aaKnown RBP20.51■□□□□ 0.87
AP3S1-204ENST00000506430 ZNF589Q86UQ0 364 aaPredicted RBP20.51■□□□□ 0.87
AP3S1-204ENST00000506430 CPXCR1Q8N123 301 aa20.51■□□□□ 0.87
AP3S1-204ENST00000506430 TEX13BQ9BXU2 312 aa20.51■□□□□ 0.87
AP3S1-204ENST00000506430 PCDH10Q9P2E7 1040 aa20.51■□□□□ 0.87
AP3S1-204ENST00000506430 ANAPC4Q9UJX5 808 aa20.51■□□□□ 0.87
AP3S1-204ENST00000506430 ZMYND8Q9ULU4 1186 aaPredicted RBP20.51■□□□□ 0.87
AP3S1-204ENST00000506430 SYNPO2Q9UMS6 1093 aa20.51■□□□□ 0.87
AP3S1-204ENST00000506430 DNAH12Q6ZR08 3092 aa20.51■□□□□ 0.87
AP3S1-204ENST00000506430 TSPY2A6NKD2 308 aa20.5■□□□□ 0.87
AP3S1-204ENST00000506430 MSCO60682 206 aa20.5■□□□□ 0.87
AP3S1-204ENST00000506430 BMP3P12645 472 aa20.5■□□□□ 0.87
AP3S1-204ENST00000506430 ALX1Q15699 326 aa20.5■□□□□ 0.87
AP3S1-204ENST00000506430 ZNF792Q3KQV3 632 aa20.5■□□□□ 0.87
AP3S1-204ENST00000506430 RAVER2Q9HCJ3 691 aaKnown RBP20.5■□□□□ 0.87
AP3S1-204ENST00000506430 FEM1BQ9UK73 627 aa20.5■□□□□ 0.87
AP3S1-204ENST00000506430 RANBP6O60518 1105 aaKnown RBP20.49■□□□□ 0.87
AP3S1-204ENST00000506430 ZBED4O75132 1171 aa20.49■□□□□ 0.87
AP3S1-204ENST00000506430 HSPD1P10809 573 aaKnown RBP20.49■□□□□ 0.87
AP3S1-204ENST00000506430 SYN1P17600 705 aa20.49■□□□□ 0.87
AP3S1-204ENST00000506430 LRRC26Q2I0M4 334 aa20.49■□□□□ 0.87
AP3S1-204ENST00000506430 SENP6Q9GZR1 1112 aaPredicted RBP20.49■□□□□ 0.87
AP3S1-204ENST00000506430 SLC38A10Q9HBR0 1119 aa20.49■□□□□ 0.87
AP3S1-204ENST00000506430 STX8Q9UNK0 236 aa20.49■□□□□ 0.87
AP3S1-204ENST00000506430 LAMA3Q16787 3333 aa20.49■□□□□ 0.87
AP3S1-204ENST00000506430 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
AP3S1-204ENST00000506430 TMEM232C9JQI7 657 aa20.48■□□□□ 0.87
AP3S1-204ENST00000506430 ATP2A1O14983 1001 aa20.48■□□□□ 0.87
AP3S1-204ENST00000506430 SEPT4O43236 478 aa20.48■□□□□ 0.87
AP3S1-204ENST00000506430 FGRP09769 529 aa20.48■□□□□ 0.87
AP3S1-204ENST00000506430 MCCP23508 829 aa20.48■□□□□ 0.87
AP3S1-204ENST00000506430 COPB2P35606 906 aa20.48■□□□□ 0.87
AP3S1-204ENST00000506430 GJC2Q5T442 439 aaPredicted RBP20.48■□□□□ 0.87
AP3S1-204ENST00000506430 TICAM2Q86XR7 235 aa20.48■□□□□ 0.87
AP3S1-204ENST00000506430 TINF2Q9BSI4 451 aa20.48■□□□□ 0.87
AP3S1-204ENST00000506430 OSBPL3Q9H4L5 887 aa20.48■□□□□ 0.87
AP3S1-204ENST00000506430 SDSP20132 328 aa20.47■□□□□ 0.87
AP3S1-204ENST00000506430 RASGRP2Q7LDG7 609 aa20.47■□□□□ 0.87
AP3S1-204ENST00000506430 ISY1Q9ULR0 285 aaKnown RBP20.47■□□□□ 0.87
AP3S1-204ENST00000506430 DIS3Q9Y2L1 958 aaKnown RBP20.47■□□□□ 0.87
AP3S1-204ENST00000506430 CTDP1Q9Y5B0 961 aaPredicted RBP20.47■□□□□ 0.87
AP3S1-204ENST00000506430 ZNFX1Q9P2E3 1918 aaKnown RBP20.47■□□□□ 0.87
AP3S1-204ENST00000506430 DNM1LO00429 736 aa20.46■□□□□ 0.87
AP3S1-204ENST00000506430 ORC4O43929 436 aa20.46■□□□□ 0.87
AP3S1-204ENST00000506430 TAL1P17542 331 aaPredicted RBP20.46■□□□□ 0.87
AP3S1-204ENST00000506430 SLC1A4P43007 532 aa20.46■□□□□ 0.87
AP3S1-204ENST00000506430 HAND2P61296 217 aa20.46■□□□□ 0.87
AP3S1-204ENST00000506430 RRP12Q5JTH9 1297 aaKnown RBP20.46■□□□□ 0.87
AP3S1-204ENST00000506430 GMCL1Q96IK5 515 aa20.46■□□□□ 0.87
AP3S1-204ENST00000506430 CCDC171Q6TFL3 1326 aa20.46■□□□□ 0.87
AP3S1-204ENST00000506430 FRMPD3Q5JV73 1810 aa20.46■□□□□ 0.87
AP3S1-204ENST00000506430 MYCNP04198 464 aaPredicted RBP20.45■□□□□ 0.86
AP3S1-204ENST00000506430 NOVP48745 357 aa20.45■□□□□ 0.86
AP3S1-204ENST00000506430 ATN1P54259 1190 aaPredicted RBP20.45■□□□□ 0.86
AP3S1-204ENST00000506430 KCTD1Q719H9 257 aa20.45■□□□□ 0.86
AP3S1-204ENST00000506430 STAG1Q8WVM7 1258 aa20.45■□□□□ 0.86
AP3S1-204ENST00000506430 DDX11Q96FC9 970 aa20.45■□□□□ 0.86
AP3S1-204ENST00000506430 GDF15Q99988 308 aa20.45■□□□□ 0.86
AP3S1-204ENST00000506430 TOMM22Q9NS69 142 aa20.45■□□□□ 0.86
AP3S1-204ENST00000506430 MTMR7Q9Y216 660 aa20.45■□□□□ 0.86
AP3S1-204ENST00000506430 DNAJC25-GNG10A0A024R161 153 aa20.44■□□□□ 0.86
AP3S1-204ENST00000506430 STAT2P52630 851 aa20.44■□□□□ 0.86
AP3S1-204ENST00000506430 RCSD1Q6JBY9 416 aa20.44■□□□□ 0.86
AP3S1-204ENST00000506430 CWC27Q6UX04 472 aaKnown RBP20.44■□□□□ 0.86
AP3S1-204ENST00000506430 ARRDC4Q8NCT1 418 aa20.44■□□□□ 0.86
AP3S1-204ENST00000506430 ZNF865P0CJ78 1059 aaPredicted RBP20.43■□□□□ 0.86
AP3S1-204ENST00000506430 OAZ1P54368 228 aa20.43■□□□□ 0.86
AP3S1-204ENST00000506430 SNAP25P60880 206 aa20.43■□□□□ 0.86
AP3S1-204ENST00000506430 IRX6P78412 446 aaPredicted RBP20.43■□□□□ 0.86
AP3S1-204ENST00000506430 IKQ13123 557 aaPredicted RBP20.43■□□□□ 0.86
AP3S1-204ENST00000506430 PPP4R3BQ5MIZ7 849 aa20.43■□□□□ 0.86
AP3S1-204ENST00000506430 CHURC1Q8WUH1 139 aa20.43■□□□□ 0.86
AP3S1-204ENST00000506430 AGBL1Q96MI9 1066 aa20.43■□□□□ 0.86
AP3S1-204ENST00000506430 HOMER2Q9NSB8 354 aa20.43■□□□□ 0.86
AP3S1-204ENST00000506430 NRBP1Q9UHY1 535 aa20.43■□□□□ 0.86
AP3S1-204ENST00000506430 ZNF536O15090 1300 aa20.43■□□□□ 0.86
AP3S1-204ENST00000506430 SNAI1O95863 264 aaPredicted RBP20.42■□□□□ 0.86
AP3S1-204ENST00000506430 MAGEA10P43363 369 aaPredicted RBP20.42■□□□□ 0.86
AP3S1-204ENST00000506430 FAM160B2Q86V87 743 aa20.42■□□□□ 0.86
AP3S1-204ENST00000506430 ANKRD35Q8N283 1001 aa20.42■□□□□ 0.86
AP3S1-204ENST00000506430 CHST13Q8NET6 341 aa20.42■□□□□ 0.86
AP3S1-204ENST00000506430 ZMYM6O95789 1325 aa20.42■□□□□ 0.86
AP3S1-204ENST00000506430 LRRC41Q15345 812 aa20.41■□□□□ 0.86
AP3S1-204ENST00000506430 MAMDC4Q6UXC1 1216 aa20.41■□□□□ 0.86
AP3S1-204ENST00000506430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.41■□□□□ 0.86
AP3S1-204ENST00000506430 TBC1D10CQ8IV04 446 aa20.41■□□□□ 0.86
AP3S1-204ENST00000506430 LENG1Q96BZ8 264 aaPredicted RBP20.41■□□□□ 0.86
AP3S1-204ENST00000506430 FGD4Q96M96 766 aa20.41■□□□□ 0.86
AP3S1-204ENST00000506430 TMEM47Q9BQJ4 181 aa20.41■□□□□ 0.86
AP3S1-204ENST00000506430 PRR12Q9ULL5 1215 aa20.41■□□□□ 0.86
AP3S1-204ENST00000506430 CNPY2Q9Y2B0 182 aa20.41■□□□□ 0.86
AP3S1-204ENST00000506430 SMCHD1A6NHR9 2005 aa20.4■□□□□ 0.86
AP3S1-204ENST00000506430 KBTBD13C9JR72 458 aa20.4■□□□□ 0.86
AP3S1-204ENST00000506430 PLA2G6O60733 806 aa20.4■□□□□ 0.86
AP3S1-204ENST00000506430 FDX1P10109 184 aa20.4■□□□□ 0.86
AP3S1-204ENST00000506430 RARBP10826 455 aa20.4■□□□□ 0.86
AP3S1-204ENST00000506430 PDE4AP27815 886 aa20.4■□□□□ 0.86
AP3S1-204ENST00000506430 BMP8BP34820 402 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms