RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 CCT2P78371 535 aaKnown RBP13.02□□□□□ -0.33
TRIM23-205ENST00000506400 TTBK2Q6IQ55 1244 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 RASGRP2Q7LDG7 609 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 HSCBQ8IWL3 235 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 STAG2Q8N3U4 1231 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 PTPN18Q99952 460 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 FAM217BQ9NTX9 383 aaPredicted RBP13.02□□□□□ -0.33
TRIM23-205ENST00000506400 LOC285556D6RIA3 1793 aa13.02□□□□□ -0.33
TRIM23-205ENST00000506400 MYH4Q9Y623 1939 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 K7ELQ4 463 aaPredicted RBP13.01□□□□□ -0.33
TRIM23-205ENST00000506400 CDKL5O76039 1030 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 CDC27P30260 824 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 ADD1P35611 737 aaKnown RBP13.01□□□□□ -0.33
TRIM23-205ENST00000506400 SCRN1Q12765 414 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 SYDE2Q5VT97 1194 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 TMTC3Q6ZXV5 915 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 FAM43AQ8N2R8 423 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 GTF3C2Q8WUA4 911 aaPredicted RBP13.01□□□□□ -0.33
TRIM23-205ENST00000506400 GTF3C6Q969F1 213 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 TMX3Q96JJ7 454 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 PARK7Q99497 189 aaKnown RBP13.01□□□□□ -0.33
TRIM23-205ENST00000506400 SPZ1Q9BXG8 430 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 UBA5Q9GZZ9 404 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 ASCC2Q9H1I8 757 aaPredicted RBP13.01□□□□□ -0.33
TRIM23-205ENST00000506400 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 PRR12Q9ULL5 1215 aa13.01□□□□□ -0.33
TRIM23-205ENST00000506400 IGF2BP3O00425 579 aaKnown RBP eCLIP13□□□□□ -0.33
TRIM23-205ENST00000506400 ZBED4O75132 1171 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 LARGE1O95461 756 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 IFNAR1P17181 557 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 SLC16A2P36021 539 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 BECN1Q14457 450 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 LBX2Q6XYB7 198 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 SRBD1Q8N5C6 995 aaKnown RBP13□□□□□ -0.33
TRIM23-205ENST00000506400 NECAB1Q8N987 351 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 KIFC2Q96AC6 838 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 ZIC5Q96T25 663 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 RIOX1Q9H6W3 641 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 NCOA5Q9HCD5 579 aaKnown RBP13□□□□□ -0.33
TRIM23-205ENST00000506400 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
TRIM23-205ENST00000506400 RBM27Q9P2N5 1060 aaKnown RBP13□□□□□ -0.33
TRIM23-205ENST00000506400 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
TRIM23-205ENST00000506400 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 GCLCP48506 637 aaPredicted RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 HERVK_113P62684 666 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 AKAP17AQ02040 695 aaKnown RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 TAF1CQ15572 869 aaPredicted RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 NTRK3Q16288 839 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 CCDC83Q8IWF9 413 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 ADGRF4Q8IZF3 695 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 MB21D1Q8N884 522 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 SMCR8Q8TEV9 937 aaPredicted RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 RRP36Q96EU6 259 aaKnown RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 P2RX7Q99572 595 aaKnown RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 LLPHQ9BRT6 129 aaKnown RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 RNF26Q9BY78 433 aaPredicted RBP12.99□□□□□ -0.33
TRIM23-205ENST00000506400 JMJD4Q9H9V9 463 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 ZFYVE28Q9HCC9 887 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 PNMA2Q9UL42 364 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 ADAMTS5Q9UNA0 930 aa12.99□□□□□ -0.33
TRIM23-205ENST00000506400 VWA5AO00534 786 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 PRPF3O43395 683 aaKnown RBP12.98□□□□□ -0.33
TRIM23-205ENST00000506400 CYTH3O43739 400 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 ANP32AP39687 249 aaKnown RBP12.98□□□□□ -0.33
TRIM23-205ENST00000506400 SSRP1Q08945 709 aaKnown RBP12.98□□□□□ -0.33
TRIM23-205ENST00000506400 FUT2Q10981 343 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 TRAF1Q13077 416 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 CUL4AQ13619 759 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 NBPF11Q86T75 865 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 TRIM22Q8IYM9 498 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 ATG4CQ96DT6 458 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 MTMR8Q96EF0 704 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 RANBP17Q9H2T7 1088 aaKnown RBP12.98□□□□□ -0.33
TRIM23-205ENST00000506400 CPVLQ9H3G5 476 aa12.98□□□□□ -0.33
TRIM23-205ENST00000506400 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.98□□□□□ -0.33
TRIM23-205ENST00000506400 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
TRIM23-205ENST00000506400 CA12O43570 354 aa12.97□□□□□ -0.33
TRIM23-205ENST00000506400 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
TRIM23-205ENST00000506400 CYP2C8P10632 490 aa12.97□□□□□ -0.33
TRIM23-205ENST00000506400 OAZ1P54368 228 aa12.97□□□□□ -0.33
TRIM23-205ENST00000506400 MAP2K1Q02750 393 aaPredicted RBP12.97□□□□□ -0.33
TRIM23-205ENST00000506400 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
TRIM23-205ENST00000506400 SLC26A6Q9BXS9 759 aa12.97□□□□□ -0.33
TRIM23-205ENST00000506400 SLC38A10Q9HBR0 1119 aa12.97□□□□□ -0.33
TRIM23-205ENST00000506400 SEC63Q9UGP8 760 aaKnown RBP12.97□□□□□ -0.33
TRIM23-205ENST00000506400 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
TRIM23-205ENST00000506400 THSD7BQ9C0I4 1608 aa12.97□□□□□ -0.33
TRIM23-205ENST00000506400 PTPRFP10586 1907 aa12.97□□□□□ -0.33
TRIM23-205ENST00000506400 STK36Q9NRP7 1315 aa12.96□□□□□ -0.33
TRIM23-205ENST00000506400 PNMA6FA0A0J9YX94 578 aa12.96□□□□□ -0.33
TRIM23-205ENST00000506400 ATP2A1O14983 1001 aa12.96□□□□□ -0.33
TRIM23-205ENST00000506400 ZBTB5O15062 677 aa12.96□□□□□ -0.33
TRIM23-205ENST00000506400 DEXIO95424 95 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms