RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 ZMYND12Q9H0C1 365 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 COL2A1P02458 1487 aaPredicted RBP8.31□□□□□ -1.08
TNPO1-204ENST00000506351 FRMPD2Q68DX3 1309 aaPredicted RBP8.31□□□□□ -1.08
TNPO1-204ENST00000506351 COL4A5P29400 1685 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 TTLL1O95922 423 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 SLFN14P0C7P3 912 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 LRMPQ12912 555 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 NOLC1Q14978 699 aaKnown RBP eCLIP8.31□□□□□ -1.08
TNPO1-204ENST00000506351 HOMER1Q86YM7 354 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 SPATA20Q8TB22 786 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 RIOX1Q9H6W3 641 aa8.31□□□□□ -1.08
TNPO1-204ENST00000506351 SEC63Q9UGP8 760 aaKnown RBP8.31□□□□□ -1.08
TNPO1-204ENST00000506351 hCG_1984214I3L0E3 225 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 EIF6P56537 245 aaKnown RBP8.3□□□□□ -1.08
TNPO1-204ENST00000506351 ZFPM1Q8IX07 1006 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 ZNF713Q8N859 430 aaPredicted RBP8.3□□□□□ -1.08
TNPO1-204ENST00000506351 PAGE5Q96GU1 130 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 PIGSQ96S52 555 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 XPO4Q9C0E2 1151 aaKnown RBP8.3□□□□□ -1.08
TNPO1-204ENST00000506351 DNAJC18Q9H819 358 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 ESYT2A0FGR8 921 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 SMC2O95347 1197 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 LMOD1P29536 600 aaPredicted RBP8.3□□□□□ -1.08
TNPO1-204ENST00000506351 LONP1P36776 959 aaKnown RBP8.3□□□□□ -1.08
TNPO1-204ENST00000506351 E2F4Q16254 413 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 INF2Q27J81 1249 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 KRT25Q7Z3Z0 450 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 SUPT20HQ8NEM7 779 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 CACTINQ8WUQ7 758 aaKnown RBP8.3□□□□□ -1.08
TNPO1-204ENST00000506351 CCDC34Q96HJ3 373 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 IDI2Q9BXS1 227 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 IFNKQ9P0W0 207 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 FAM198AQ9UFP1 575 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 DACH1Q9UI36 760 aa8.3□□□□□ -1.08
TNPO1-204ENST00000506351 MYO1BO43795 1136 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 CACNB3P54284 484 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 FANCCQ00597 558 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 DPYDQ12882 1025 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 CC2D2BQ6DHV5 1058 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 MLKLQ8NB16 471 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 PYM1Q9BRP8 204 aaKnown RBP8.29□□□□□ -1.08
TNPO1-204ENST00000506351 UBA5Q9GZZ9 404 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 C6orf50Q9HD87 102 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 SERPINA10Q9UK55 444 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 SMCO2A6NFE2 343 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 NPM3O75607 178 aaKnown RBP8.29□□□□□ -1.08
TNPO1-204ENST00000506351 ATP1A3P13637 1013 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 GNA11P29992 359 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 AFMP43652 599 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 RBM5P52756 815 aaKnown RBP eCLIP8.29□□□□□ -1.08
TNPO1-204ENST00000506351 ZNF543Q08ER8 600 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 PDXDC2PQ6P474 469 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 DHX36Q9H2U1 1008 aaKnown RBP8.29□□□□□ -1.08
TNPO1-204ENST00000506351 DDTLA6NHG4 134 aaPredicted RBP8.29□□□□□ -1.08
TNPO1-204ENST00000506351 YDJCA8MPS7 323 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 MPHOSPH10O00566 681 aaKnown RBP8.29□□□□□ -1.08
TNPO1-204ENST00000506351 NEMFO60524 1076 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 SLURP2P0DP57 97 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 FMR1Q06787 632 aaKnown RBP eCLIP8.29□□□□□ -1.082e-6■■□□□ 12.9
TNPO1-204ENST00000506351 TCP10Q12799 353 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 NONOQ15233 471 aaKnown RBP eCLIP8.29□□□□□ -1.08
TNPO1-204ENST00000506351 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 SOGA3Q5TF21 947 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 SH3BP5LQ7L8J4 393 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 LRRC8AQ8IWT6 810 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 CCDC17Q96LX7 622 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 TMEM60Q9H2L4 133 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 VAT1LQ9HCJ6 419 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 IMPACTQ9P2X3 320 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 R3HCC1Q9Y3T6 440 aaKnown RBP8.29□□□□□ -1.08
TNPO1-204ENST00000506351 ATRNL1Q5VV63 1379 aa8.29□□□□□ -1.08
TNPO1-204ENST00000506351 LAD1O00515 517 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 PPIP5K2O43314 1243 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 PRPHP41219 470 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 GSDMDP57764 484 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 ARID5BQ14865 1188 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 PPP1R18Q6NYC8 613 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 IQUBQ8NA54 791 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 PDGFDQ9GZP0 370 aaPredicted RBP8.28□□□□□ -1.08
TNPO1-204ENST00000506351 GPCPD1Q9NPB8 672 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 FAM196BA6NMK8 535 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 CBFA2T2O43439 604 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 C21orf2O43822 256 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 CASP1P29466 404 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 TXLNAP40222 546 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 TERF1P54274 439 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 TMC6Q7Z403 805 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 FILIP1Q7Z7B0 1213 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 FANCLQ9NW38 375 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 PI4KBQ9UBF8 816 aa8.28□□□□□ -1.08
TNPO1-204ENST00000506351 ADCY7P51828 1080 aa8.27□□□□□ -1.08
TNPO1-204ENST00000506351 CCZ1BP86790 482 aa8.27□□□□□ -1.08
TNPO1-204ENST00000506351 CCZ1P86791 482 aaPredicted RBP8.27□□□□□ -1.08
TNPO1-204ENST00000506351 CCDC96Q2M329 555 aa8.27□□□□□ -1.08
TNPO1-204ENST00000506351 CFAP100Q494V2 611 aa8.27□□□□□ -1.08
TNPO1-204ENST00000506351 DTHD1Q6ZMT9 781 aa8.27□□□□□ -1.08
TNPO1-204ENST00000506351 NEK8Q86SG6 692 aa8.27□□□□□ -1.08
TNPO1-204ENST00000506351 TRMT44Q8IYL2 757 aaKnown RBP8.27□□□□□ -1.08
TNPO1-204ENST00000506351 REXO1Q8N1G1 1221 aaKnown RBP8.27□□□□□ -1.08
TNPO1-204ENST00000506351 ENOX1Q8TC92 643 aaKnown RBP8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms