RNA–Protein interactions for RNA: ENST00000506029.1

SNRPCP16-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 16, humanhuman

BASIC

Gene SNRPCP16, Length 210 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP16-201ENST00000506029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.47□□□□□ -0.57
SNRPCP16-201ENST00000506029 RIOX2Q8IUF8 465 aa11.47□□□□□ -0.57
SNRPCP16-201ENST00000506029 MB21D2Q8IYB1 491 aaPredicted RBP11.47□□□□□ -0.57
SNRPCP16-201ENST00000506029 ZNF333Q96JL9 665 aa11.47□□□□□ -0.57
SNRPCP16-201ENST00000506029 APBA2Q99767 749 aa11.47□□□□□ -0.57
SNRPCP16-201ENST00000506029 NUDT12Q9BQG2 462 aa11.47□□□□□ -0.57
SNRPCP16-201ENST00000506029 MOV10L1Q9BXT6 1211 aaKnown RBP11.47□□□□□ -0.57
SNRPCP16-201ENST00000506029 PORCNQ9H237 461 aa11.47□□□□□ -0.57
SNRPCP16-201ENST00000506029 PNMA2Q9UL42 364 aa11.47□□□□□ -0.57
SNRPCP16-201ENST00000506029 HOXC6P09630 235 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 ERCC3P19447 782 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 GRK4P32298 578 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 MCM5P33992 734 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 STAT3P40763 770 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 ZNF543Q08ER8 600 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 IKQ13123 557 aaPredicted RBP11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 SEC23AQ15436 765 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 CCDC96Q2M329 555 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 ASPRV1Q53RT3 343 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 MORN1Q5T089 497 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 IFFO2Q5TF58 517 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 NKX2-3Q8TAU0 364 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 USP6NLQ92738 828 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 ZKSCAN3Q9BRR0 538 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 FBXO40Q9UH90 709 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 GJD2Q9UKL4 321 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 ISY1Q9ULR0 285 aaKnown RBP11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 CTDP1Q9Y5B0 961 aaPredicted RBP11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 TAF6LQ9Y6J9 622 aa11.46□□□□□ -0.57
SNRPCP16-201ENST00000506029 BRCA2P51587 3418 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 IFIT3O14879 490 aaKnown RBP11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 ADCY3O60266 1144 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 PEX10O60683 326 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 HMGCRP04035 888 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 HMGB1P09429 215 aaKnown RBP11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 PTPREP23469 700 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 UBXN2AP68543 259 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 MAP2K5Q13163 448 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 PLS1Q14651 629 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 TKFCQ3LXA3 575 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 SNRNP48Q6IEG0 339 aaKnown RBP11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 KCTD1Q719H9 257 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 CYB5R4Q7L1T6 521 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 KCNB2Q92953 911 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 TMEM87BQ96K49 555 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 SLC5A4Q9NY91 659 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 GABRQQ9UN88 632 aa11.45□□□□□ -0.58
SNRPCP16-201ENST00000506029 FCER1AP12319 257 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 CAPN2P17655 700 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 HSPA4P34932 840 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 LIFRP42702 1097 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 ANTXR2P58335 489 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 WTAPQ15007 396 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 SYDE2Q5VT97 1194 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 WDR78Q5VTH9 848 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 NCAPG2Q86XI2 1143 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 TMTC2Q8N394 836 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 CHST13Q8NET6 341 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 MAP3K14Q99558 947 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 RANBP17Q9H2T7 1088 aaKnown RBP11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
SNRPCP16-201ENST00000506029 PRC1O43663 620 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 DDAH1O94760 285 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 ICAM1P05362 532 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 PARP1P09874 1014 aaKnown RBP11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 ADORA2AP29274 412 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 KCTD2Q14681 263 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 TMEM67Q5HYA8 995 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 CATIPQ7Z7H3 387 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 NEK1Q96PY6 1258 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 MAF1Q9H063 256 aa11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 RBBP6Q7Z6E9 1792 aaKnown RBP11.43□□□□□ -0.58
SNRPCP16-201ENST00000506029 PLXNB2O15031 1838 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 ZNF536O15090 1300 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 FRMPD2Q68DX3 1309 aaPredicted RBP11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 CCDC85CA6NKD9 419 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 SH2B2O14492 632 aaPredicted RBP11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 INHAP05111 366 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 TROAPQ12815 778 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 OLFML2BQ68BL8 750 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 IGDCC4Q8TDY8 1250 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 SH3TC2Q8TF17 1288 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 MMP19Q99542 508 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 ACAD9Q9H845 621 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 LY9Q9HBG7 655 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 MTMR7Q9Y216 660 aa11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 DIS3Q9Y2L1 958 aaKnown RBP11.42□□□□□ -0.58
SNRPCP16-201ENST00000506029 PFASO15067 1338 aa11.41□□□□□ -0.58
SNRPCP16-201ENST00000506029 CALM1P0DP23 149 aa11.41□□□□□ -0.58
SNRPCP16-201ENST00000506029 CALM2P0DP24 149 aa11.41□□□□□ -0.58
SNRPCP16-201ENST00000506029 CALM3P0DP25 149 aa11.41□□□□□ -0.58
SNRPCP16-201ENST00000506029 ELNP15502 786 aa11.41□□□□□ -0.58
SNRPCP16-201ENST00000506029 CYP2B6P20813 491 aa11.41□□□□□ -0.58
SNRPCP16-201ENST00000506029 PSMA5P28066 241 aa11.41□□□□□ -0.58
SNRPCP16-201ENST00000506029 KIF5BP33176 963 aa11.41□□□□□ -0.58
SNRPCP16-201ENST00000506029 RCAN1P53805 252 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms