RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 CHD1LQ86WJ1 897 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 C7orf61Q8IZ16 206 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 LRRC47Q8N1G4 583 aaKnown RBP12.34□□□□□ -0.43
NR1I3-222ENST00000506018 ARRDC4Q8NCT1 418 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 KIFC2Q96AC6 838 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 MAML3Q96JK9 1138 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 NUP88Q99567 741 aaPredicted RBP12.34□□□□□ -0.43
NR1I3-222ENST00000506018 TOMM22Q9NS69 142 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 NRBP1Q9UHY1 535 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 ZNF214Q9UL59 606 aaPredicted RBP12.34□□□□□ -0.43
NR1I3-222ENST00000506018 STX8Q9UNK0 236 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 DIS3Q9Y2L1 958 aaKnown RBP12.34□□□□□ -0.43
NR1I3-222ENST00000506018 TRIOBPQ9H2D6 2365 aa12.34□□□□□ -0.43
NR1I3-222ENST00000506018 A0A1W2PPC1 479 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 HIP1O00291 1037 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 DNM1LO00429 736 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 SEPT4O43236 478 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 RANBP6O60518 1105 aaKnown RBP12.33□□□□□ -0.44
NR1I3-222ENST00000506018 COBLO75128 1261 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 BMP3P12645 472 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 SLC1A4P43007 532 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 STAT2P52630 851 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 OAZ1P54368 228 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 IRX6P78412 446 aaPredicted RBP12.33□□□□□ -0.44
NR1I3-222ENST00000506018 ALX1Q15699 326 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 SLFN13Q68D06 897 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 FAM160B2Q86V87 743 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 CHURC1Q8WUH1 139 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 DDX11Q96FC9 970 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 FBXO40Q9UH90 709 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 ANAPC4Q9UJX5 808 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.44
NR1I3-222ENST00000506018 KBTBD13C9JR72 458 aa12.32□□□□□ -0.44
NR1I3-222ENST00000506018 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
NR1I3-222ENST00000506018 ATP2A1O14983 1001 aa12.32□□□□□ -0.44
NR1I3-222ENST00000506018 PCP11498 1178 aaKnown RBP12.32□□□□□ -0.44
NR1I3-222ENST00000506018 SLC4A3P48751 1232 aa12.32□□□□□ -0.44
NR1I3-222ENST00000506018 CTDSPL2Q05D32 466 aa12.32□□□□□ -0.44
NR1I3-222ENST00000506018 CPXCR1Q8N123 301 aa12.32□□□□□ -0.44
NR1I3-222ENST00000506018 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
NR1I3-222ENST00000506018 REPS2Q8NFH8 660 aa12.32□□□□□ -0.44
NR1I3-222ENST00000506018 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
NR1I3-222ENST00000506018 ZMYM6O95789 1325 aa12.32□□□□□ -0.44
NR1I3-222ENST00000506018 ORC4O43929 436 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 COL6A1P12109 1028 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
NR1I3-222ENST00000506018 NUCB1Q02818 461 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 NMIQ13287 307 aaPredicted RBP12.31□□□□□ -0.44
NR1I3-222ENST00000506018 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 GMCL1Q96IK5 515 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 TINF2Q9BSI4 451 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 SENP6Q9GZR1 1112 aaPredicted RBP12.31□□□□□ -0.44
NR1I3-222ENST00000506018 OSBPL3Q9H4L5 887 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
NR1I3-222ENST00000506018 SLC38A10Q9HBR0 1119 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
NR1I3-222ENST00000506018 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
NR1I3-222ENST00000506018 CCDC171Q6TFL3 1326 aa12.31□□□□□ -0.44
NR1I3-222ENST00000506018 A0A0D9SFI3 127 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 TMEM232C9JQI7 657 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 IGHA2P01877 340 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 FGAP02671 866 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 PGK2P07205 417 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
NR1I3-222ENST00000506018 RARBP10826 455 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 NT5C2P49902 561 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 FXR1P51114 621 aaKnown RBP eCLIP12.3□□□□□ -0.44
NR1I3-222ENST00000506018 ZNF792Q3KQV3 632 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
NR1I3-222ENST00000506018 VPS53Q5VIR6 699 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 STAG1Q8WVM7 1258 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 RAVER2Q9HCJ3 691 aaKnown RBP12.3□□□□□ -0.44
NR1I3-222ENST00000506018 PRKAG2Q9UGJ0 569 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 PFASO15067 1338 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 PLA2G6O60733 806 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 AKR1A1P14550 325 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 SDSP20132 328 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 MCCP23508 829 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 TKFCQ3LXA3 575 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 RCSD1Q6JBY9 416 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 MFSD6Q6ZSS7 791 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 RNF180Q86T96 592 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 PLEKHM2Q8IWE5 1019 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
NR1I3-222ENST00000506018 ZMYND8Q9ULU4 1186 aaPredicted RBP12.3□□□□□ -0.44
NR1I3-222ENST00000506018 MCM3APO60318 1980 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 SYNGAP1Q96PV0 1343 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 FOXP2O15409 715 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 IGHDP01880 384 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 FGRP09769 529 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 BMP8BP34820 402 aa12.29□□□□□ -0.44
NR1I3-222ENST00000506018 CCDC96Q2M329 555 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms