RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 LRRC41Q15345 812 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 FAM47AQ5JRC9 791 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 SLFN13Q68D06 897 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 SLC39A5Q6ZMH5 540 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 LRRC47Q8N1G4 583 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 LRCH3Q96II8 777 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 SLC38A10Q9HBR0 1119 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 CNPY2Q9Y2B0 182 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 SALL3Q9BXA9 1300 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 CEP290O15078 2479 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 RLFQ13129 1914 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 PLIN4Q96Q06 1357 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 BMP3P12645 472 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 AKR1A1P14550 325 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 ADCYAP1R1P41586 468 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 AAMPQ13685 434 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 RNF180Q86T96 592 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 TICAM2Q86XR7 235 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 XPNPEP3Q9NQH7 507 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 FBXO40Q9UH90 709 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 ATP11BQ9Y2G3 1177 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 RIPK3Q9Y572 518 aa14.32□□□□□ -0.12
PDLIM7-214ENST00000505746 MYH7P12883 1935 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 TRIOBPQ9H2D6 2365 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 RANBP2P49792 3224 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 PDE1AP54750 535 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 CCDC129Q6ZRS4 1044 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 ANKRD35Q8N283 1001 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 CHST13Q8NET6 341 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 CHURC1Q8WUH1 139 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 RAVER2Q9HCJ3 691 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 HELLSQ9NRZ9 838 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 ISY1Q9ULR0 285 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 SYNGAP1Q96PV0 1343 aa14.31□□□□□ -0.12
PDLIM7-214ENST00000505746 DNAJC25-GNG10A0A024R161 153 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 TSPY2A6NKD2 308 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 TMEM232C9JQI7 657 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 ZNF865P0CJ78 1059 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 TAL1P17542 331 aaPredicted RBP14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 SLC1A4P43007 532 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 STAT2P52630 851 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 SNX17Q15036 470 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 C1orf53Q5VUE5 145 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 MAMDC4Q6UXC1 1216 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 FAM160B2Q86V87 743 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 FERMT2Q96AC1 680 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 FAM184BQ9ULE4 1060 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 STX8Q9UNK0 236 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 PHF24Q9UPV7 400 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 MYH8P13535 1937 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 ALPK3Q96L96 1907 aa14.3□□□□□ -0.12
PDLIM7-214ENST00000505746 FOXP2O15409 715 aa14.29□□□□□ -0.12
PDLIM7-214ENST00000505746 PGK1P00558 417 aa14.29□□□□□ -0.12
PDLIM7-214ENST00000505746 CTDSPL2Q05D32 466 aa14.29□□□□□ -0.12
PDLIM7-214ENST00000505746 IKQ13123 557 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-214ENST00000505746 ALX1Q15699 326 aa14.29□□□□□ -0.12
PDLIM7-214ENST00000505746 TRIM60Q495X7 471 aa14.29□□□□□ -0.12
PDLIM7-214ENST00000505746 STAG1Q8WVM7 1258 aa14.29□□□□□ -0.12
PDLIM7-214ENST00000505746 ANAPC4Q9UJX5 808 aa14.29□□□□□ -0.12
PDLIM7-214ENST00000505746 RANBP6O60518 1105 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 PLA2G6O60733 806 aa14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 SNAI1O95863 264 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 MCCP23508 829 aa14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 MCMDC2Q4G0Z9 681 aa14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 VPS53Q5VIR6 699 aa14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 RCSD1Q6JBY9 416 aa14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 TSEN34Q9BSV6 310 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 GREB1LQ9C091 1923 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 RWDD1Q9H446 243 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 PRDM5Q9NQX1 630 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-214ENST00000505746 ORC4O43929 436 aa14.27□□□□□ -0.13
PDLIM7-214ENST00000505746 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
PDLIM7-214ENST00000505746 DEFB123Q8N688 67 aa14.27□□□□□ -0.13
PDLIM7-214ENST00000505746 ACAD9Q9H845 621 aa14.27□□□□□ -0.13
PDLIM7-214ENST00000505746 INCENPQ9NQS7 918 aa14.27□□□□□ -0.13
PDLIM7-214ENST00000505746 IL17RBQ9NRM6 502 aa14.27□□□□□ -0.13
PDLIM7-214ENST00000505746 HOMER2Q9NSB8 354 aa14.27□□□□□ -0.13
PDLIM7-214ENST00000505746 ZHX1Q9UKY1 873 aaPredicted RBP14.27□□□□□ -0.13
PDLIM7-214ENST00000505746 TRIM6-TRIM34B2RNG4 842 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 ADAMTS4O75173 837 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 DUSP11O75319 330 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 FGAP02671 866 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 FGRP09769 529 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 TLE2Q04725 743 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 ACVR2BQ13705 512 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 NUP133Q8WUM0 1156 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 FAM227BQ96M60 508 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 LNPKQ9C0E8 428 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 ABHD16BQ9H3Z7 469 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 TOMM22Q9NS69 142 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 TACC3Q9Y6A5 838 aa14.26□□□□□ -0.13
PDLIM7-214ENST00000505746 SYNRGQ9UMZ2 1314 aa14.25□□□□□ -0.13
PDLIM7-214ENST00000505746 A0A1W2PQ45 241 aaPredicted RBP14.25□□□□□ -0.13
PDLIM7-214ENST00000505746 A0A1W2PQY0 241 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms