RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 CCDC112Q8NEF3 446 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 ATRNL1Q5VV63 1379 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 TUBB4AP04350 444 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 PTGS1P23219 599 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 CCDC47Q96A33 483 aaKnown RBP12.86□□□□□ -0.35
NFKB1-205ENST00000505458 CCSER1Q9C0I3 900 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 TMOD2Q9NZR1 351 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 NYAP2Q9P242 653 aa12.86□□□□□ -0.35
NFKB1-205ENST00000505458 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
NFKB1-205ENST00000505458 CYTH3O43739 400 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 SF3B2Q13435 895 aaKnown RBP12.85□□□□□ -0.35
NFKB1-205ENST00000505458 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 REXO1Q8N1G1 1221 aaKnown RBP12.85□□□□□ -0.35
NFKB1-205ENST00000505458 KANSL2Q9H9L4 492 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 MYH4Q9Y623 1939 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 VWA3AA6NCI4 1184 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 BAG6P46379 1132 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 C7orf43Q8WVR3 580 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.35
NFKB1-205ENST00000505458 DHX58Q96C10 678 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 PSMD1Q99460 953 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 KCND1Q9NSA2 647 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 PNMA6FA0A0J9YX94 578 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 MCM7P33993 719 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 SHMT1P34896 483 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 FANCCQ00597 558 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 ZNF543Q08ER8 600 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 SLC51AQ86UW1 340 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 MKL1Q969V6 931 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 HDAC9Q9UKV0 1011 aa12.85□□□□□ -0.35
NFKB1-205ENST00000505458 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 ADCY7P51828 1080 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
NFKB1-205ENST00000505458 CTAGE1Q96RT6 745 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 SMCO2A6NFE2 343 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 F8W031 263 aaPredicted RBP12.84□□□□□ -0.35
NFKB1-205ENST00000505458 AKR1B1P15121 316 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 SPAG1Q07617 926 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 DNTTIP2Q5QJE6 756 aaKnown RBP12.84□□□□□ -0.35
NFKB1-205ENST00000505458 TMEM179Q6ZVK1 233 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 PAGE5Q96GU1 130 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 KCNF1Q9H3M0 494 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 DDX4Q9NQI0 724 aaKnown RBP12.84□□□□□ -0.35
NFKB1-205ENST00000505458 MSL1Q68DK7 614 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 LRRC8AQ8IWT6 810 aa12.84□□□□□ -0.35
NFKB1-205ENST00000505458 BAZ2BQ9UIF8 2168 aaKnown RBP12.83□□□□□ -0.36
NFKB1-205ENST00000505458 SERPINC1P01008 464 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 OR52Z1P0C646 297 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
NFKB1-205ENST00000505458 DPYDQ12882 1025 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 C4orf32Q8N8J7 132 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 DBNDD1Q9H9R9 158 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 MRPL12P52815 198 aaKnown RBP12.83□□□□□ -0.36
NFKB1-205ENST00000505458 GRIN1Q05586 938 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 E2F4Q16254 413 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 SFPQP23246 707 aaKnown RBP eCLIP12.83□□□□□ -0.36
NFKB1-205ENST00000505458 UBA7P41226 1012 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 STAT6P42226 847 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 SCNN1DP51172 638 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 PDILTQ8N807 584 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 ANKRD20A12PQ8NF67 263 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
NFKB1-205ENST00000505458 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 IFNKQ9P0W0 207 aa12.83□□□□□ -0.36
NFKB1-205ENST00000505458 HERC5Q9UII4 1024 aaKnown RBP12.83□□□□□ -0.36
NFKB1-205ENST00000505458 USP17L5A8MUK1 530 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 UBASH3AP57075 661 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 TMEM266Q2M3C6 531 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 FKBP1CQ5VVH2 108 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 TTLL6Q8N841 843 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 XPO4Q9C0E2 1151 aaKnown RBP12.82□□□□□ -0.36
NFKB1-205ENST00000505458 ARFGEF1Q9Y6D6 1849 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 AMPD3Q01432 767 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 KCNB1Q14721 858 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 SPECC1Q5M775 1068 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 TATDN1Q6P1N9 297 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 EPSTI1Q96J88 318 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 PIGSQ96S52 555 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 RIC8AQ9NPQ8 531 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 DISC1Q9NRI5 854 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 SCN9AQ15858 1988 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 PPIP5K2O43314 1243 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 STIM1Q13586 685 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 CERKLQ49MI3 558 aaPredicted RBP12.82□□□□□ -0.36
NFKB1-205ENST00000505458 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 GMCL1P1Q8NEA9 526 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 MTMR8Q96EF0 704 aa12.82□□□□□ -0.36
NFKB1-205ENST00000505458 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
NFKB1-205ENST00000505458 ADAMTSL1Q8N6G6 1762 aa12.81□□□□□ -0.36
NFKB1-205ENST00000505458 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
NFKB1-205ENST00000505458 SLC35G1Q2M3R5 365 aa12.81□□□□□ -0.36
NFKB1-205ENST00000505458 CUL5Q93034 780 aa12.81□□□□□ -0.36
NFKB1-205ENST00000505458 LMOD1P29536 600 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-205ENST00000505458 INF2Q27J81 1249 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms