RNA–Protein interactions for RNA: ENST00000504805.6

RUFY3-207, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 5

Gene RUFY3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-207ENST00000504805 VCAM1P19320 739 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 TRDNQ13061 729 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 MTFR1Q15390 333 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 RNF20Q5VTR2 975 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 RALYLQ86SE5 291 aaKnown RBP8.54□□□□□ -1.04
RUFY3-207ENST00000504805 NBPF11Q86T75 865 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
RUFY3-207ENST00000504805 LSG1Q9H089 658 aaKnown RBP8.54□□□□□ -1.04
RUFY3-207ENST00000504805 VCPKMTQ9H867 229 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 INCENPQ9NQS7 918 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 MTMR4Q9NYA4 1195 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 SYNPO2Q9UMS6 1093 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 STX8Q9UNK0 236 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 TMX2Q9Y320 296 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 MYH4Q9Y623 1939 aa8.54□□□□□ -1.04
RUFY3-207ENST00000504805 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 WDR46O15213 610 aaKnown RBP8.53□□□□□ -1.04
RUFY3-207ENST00000504805 KDM4AO75164 1064 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 HOXA7P31268 230 aaPredicted RBP8.53□□□□□ -1.04
RUFY3-207ENST00000504805 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 CCDC178Q5BJE1 867 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 IQCA1Q86XH1 822 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 SIAH1Q8IUQ4 282 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 SPICE1Q8N0Z3 855 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 GTF3C2Q8WUA4 911 aaPredicted RBP8.53□□□□□ -1.04
RUFY3-207ENST00000504805 TMEM121BQ9BXQ6 578 aaPredicted RBP8.53□□□□□ -1.04
RUFY3-207ENST00000504805 TANGO6Q9C0B7 1094 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 ASCC2Q9H1I8 757 aaPredicted RBP8.53□□□□□ -1.04
RUFY3-207ENST00000504805 RPAP3Q9H6T3 665 aaPredicted RBP8.53□□□□□ -1.04
RUFY3-207ENST00000504805 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 TCP11L1Q9NUJ3 509 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 CLIP2Q9UDT6 1046 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 TACC3Q9Y6A5 838 aa8.53□□□□□ -1.04
RUFY3-207ENST00000504805 B4E1Z4 1266 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 NMT2O60551 498 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 GCLCP48506 637 aaPredicted RBP8.52□□□□□ -1.05
RUFY3-207ENST00000504805 KIF22Q14807 665 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 C17orf99Q6UX52 265 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 LRRC47Q8N1G4 583 aaKnown RBP8.52□□□□□ -1.05
RUFY3-207ENST00000504805 RETREG2Q8NC44 543 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 RGS22Q8NE09 1264 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 GMCL1P1Q8NEA9 526 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 NCOA7Q8NI08 942 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 MKL1Q969V6 931 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 TRIM47Q96LD4 638 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 UBAC1Q9BSL1 405 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 IL17RBQ9NRM6 502 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 CPA4Q9UI42 421 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 VCANP13611 3396 aa8.52□□□□□ -1.05
RUFY3-207ENST00000504805 E7EWF7 191 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 F5H6K3 240 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 SOX1O00570 391 aaPredicted RBP8.51□□□□□ -1.05
RUFY3-207ENST00000504805 SLC27A2O14975 620 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 EIF5BO60841 1220 aaKnown RBP8.51□□□□□ -1.05
RUFY3-207ENST00000504805 NDUFB10O96000 172 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 GNRH1P01148 92 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 TOP1P11387 765 aaKnown RBP8.51□□□□□ -1.05
RUFY3-207ENST00000504805 ZKSCAN1P17029 563 aaPredicted RBP8.51□□□□□ -1.05
RUFY3-207ENST00000504805 SSTR3P32745 418 aaPredicted RBP8.51□□□□□ -1.05
RUFY3-207ENST00000504805 PRMT2P55345 433 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 HERVK_113P62684 666 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 KLRC3Q07444 240 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 SART3Q15020 963 aaKnown RBP8.51□□□□□ -1.05
RUFY3-207ENST00000504805 ARHGEF6Q15052 776 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 NECTIN1Q15223 517 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 FAM110CQ1W6H9 321 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 CREB3L3Q68CJ9 461 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 CATSPERGQ6ZRH7 1159 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 ANKRD13CQ8N6S4 541 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 TTC14Q96N46 770 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 ZSCAN10Q96SZ4 725 aaPredicted RBP8.51□□□□□ -1.05
RUFY3-207ENST00000504805 ZKSCAN3Q9BRR0 538 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 SRRDQ9UH36 339 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 ISY1Q9ULR0 285 aaKnown RBP8.51□□□□□ -1.05
RUFY3-207ENST00000504805 TNKSO95271 1327 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 MYPNQ86TC9 1320 aa8.51□□□□□ -1.05
RUFY3-207ENST00000504805 A0A0G2JMZ2 1700 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 ERICH2A1L162 156 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 EPB41L2O43491 1005 aaKnown RBP8.5□□□□□ -1.05
RUFY3-207ENST00000504805 FLOT1O75955 427 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 BCRP11274 1271 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 BMP3P12645 472 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 MCCP23508 829 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 SLC1A4P43007 532 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 GJA8P48165 433 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 NOVP48745 357 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 MDM2Q00987 491 aaPredicted RBP8.5□□□□□ -1.05
RUFY3-207ENST00000504805 KRT32Q14532 448 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 COG2Q14746 738 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 KIAA1755Q5JYT7 1200 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 FAM83BQ5T0W9 1011 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 SLFN13Q68D06 897 aa8.5□□□□□ -1.05
RUFY3-207ENST00000504805 LBX2Q6XYB7 198 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms